Pairwise Alignments

Query, 226 a.a., uracil-DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., uracil-DNA glycosylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  300 bits (768), Expect = 1e-86
 Identities = 137/217 (63%), Positives = 162/217 (74%)

Query: 5   LTWHDVIGNEKQQAYFQQTLQFVESQRQAGKVIYPPAKDVFNAFRFTEFGDVKVVILGQD 64
           +TW   I +++ Q Y+QQ + FV  +RQ GKVIYPP +DVFNAF+ T    V+VV++GQD
Sbjct: 1   MTWPAFIDHQRTQPYYQQLIAFVNQERQVGKVIYPPKEDVFNAFKTTPLEQVRVVLIGQD 60

Query: 65  PYHGPNQAHGLCFSVLPGVKTPPSLVNIYKELAQDIPGFQIPPHGYLQSWAQQGVLLLNT 124
           PYHGP+QAHGLCFSV  GVK PPSL N+YKEL  DIPGF IP HG L  WA+QG+L+LNT
Sbjct: 61  PYHGPDQAHGLCFSVKRGVKAPPSLANMYKELVNDIPGFHIPNHGDLTQWAEQGILMLNT 120

Query: 125 VLTVEQGMAHSHANTGWETFTDRVIDALNQHRNGLIFLLWGSHAQKKGQMIDRQRHHVLM 184
           VLTVEQG AHSHAN GWE FT   +  LN     +IF+LWGSHA KKG +I   +H +L 
Sbjct: 121 VLTVEQGQAHSHANAGWEIFTTEALKLLNAQERPIIFVLWGSHAIKKGAVITAPQHQILS 180

Query: 185 APHPSPLSAHRGFLGCRHFSKTNQLLQAQGIAPINWQ 221
            PHPSPLSA+RGF GC HFSK NQLL A+G API WQ
Sbjct: 181 GPHPSPLSAYRGFFGCGHFSKVNQLLMARGEAPIQWQ 217