Pairwise Alignments

Query, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., sodium/alanine transporter from Pseudomonas fluorescens FW300-N2E2

 Score =  457 bits (1175), Expect = e-133
 Identities = 218/459 (47%), Positives = 323/459 (70%), Gaps = 7/459 (1%)

Query: 4   LINLMNDLLWGSILVYLLVGVGIYFTLRLGFIQFRHFTHTFTVLKNSRKADNAGISSFQA 63
           ++ ++ND L G +L+ L+VG+G YFT+R  F+QFRHF H FTV ++S K+    +SSFQA
Sbjct: 1   MLEVINDFLSGKVLIVLIVGLGSYFTIRSRFVQFRHFFHMFTVFRDSLKSSTDQLSSFQA 60

Query: 64  LCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKTRDKDG 123
           L  SLA RVG GN+AGV +A+T GGPGA+FWMW+ A++GM++SF E +L QLYK  D +G
Sbjct: 61  LMLSLAGRVGAGNIAGVGIAVTLGGPGAVFWMWVTALVGMSSSFFECSLGQLYKRCDSEG 120

Query: 124 NYRGGPAYYMEKGLGMRWMGVLFSIFLIIAFGLVFNAVQANSITNAMKTAFGFEPMLIGI 183
            +RGGP+YY++ GL  RW+G++ +  L++ FG  FN +QA+++T+++  AFGF+    G+
Sbjct: 121 QFRGGPSYYIQHGLQKRWLGMIMAFLLLVTFGFAFNGLQAHAVTHSLNNAFGFDTTYTGL 180

Query: 184 GIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPDAISLIFKSAFG 243
           G+ +L   V  GGI++IA+ A+L+VP    AY+A+ ++V+V+ ++ VP  ++ I KSAFG
Sbjct: 181 GLAVLLGLVFIGGIKRIAKVADLLVPVKTLAYIAVTIYVIVLQFDHVPAMLATIVKSAFG 240

Query: 244 LQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHPASQGYVQMLGV 303
           L +A  G +G AI    + GVKRG+F+NEAG+GSAPN AA A+    HP +QG VQ   V
Sbjct: 241 LDQAFGGLIGSAI----VMGVKRGVFANEAGLGSAPNVAAVAS--VEHPVAQGVVQAFSV 294

Query: 304 FIDTIVICTATVAIILMSGEYVPHGELTGIELTQRALSSQVGDWGGIFIAFAIFFFAFTS 363
           F+DT VICT T  +IL+SG Y P  E  GI LTQ +L++ VGDWG +FI+ A+  F FTS
Sbjct: 295 FLDTFVICTCTALLILLSGFYTPGFEGDGIALTQNSLAAVVGDWGRMFISVALALFVFTS 354

Query: 364 IIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAMADVSMGLMAIVN 423
           I+ NY   E NL F+   N+K L+ +R + L ++ +G++  L TV+A AD++M L+A VN
Sbjct: 355 ILYNYYLGENNLRFMLGENRKALIAYRALVLVLIFWGAIENLSTVFAFADITMTLLAFVN 414

Query: 424 LVAILLLSGIVIKLAKDYNRQLDAG-KVPTFDANDYPEL 461
           L+A+ LL  + +++ +DY+ Q  AG K P FD++ +P+L
Sbjct: 415 LIALFLLFKVGMRILRDYDDQRSAGIKTPVFDSSKFPDL 453