Pairwise Alignments

Query, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., amino acid carrier protein from Pseudomonas stutzeri RCH2

 Score =  467 bits (1202), Expect = e-136
 Identities = 229/471 (48%), Positives = 339/471 (71%), Gaps = 10/471 (2%)

Query: 4   LINLMNDLLWGSILVYLLVGVGIYFTLRLGFIQFRHFTHTFTVLKNSRKADNAGISSFQA 63
           +++L+NDL+W  +L+ +L+G+G+ FT+R GF+QFR+F + FT+  ++ +     +SSFQA
Sbjct: 1   MLDLLNDLIWSKLLIVMLIGLGLLFTIRSGFVQFRYFGNMFTIFGHAFERQPGQLSSFQA 60

Query: 64  LCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKTRDKDG 123
           L  S+A RVG GN+AGV+VA+  GGPGAIFWMW++A++GMATS+ E +LAQLYK R+ DG
Sbjct: 61  LMLSVAGRVGAGNIAGVSVAIMLGGPGAIFWMWVVALVGMATSYFECSLAQLYKRREPDG 120

Query: 124 NYRGGPAYYMEKGLGMRWMGVLFSIFLIIAFGLVFNAVQANSITNAMKTAFGFEPMLIGI 183
            YRGGPA+Y++ GLG RW+G++ SI L++ FG  FNAVQ+ ++ +++   FG   +  GI
Sbjct: 121 TYRGGPAFYIQHGLGQRWLGIVVSILLLMTFGFGFNAVQSFTVASSLHDTFGVPTVASGI 180

Query: 184 GIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPDAISLIFKSAFG 243
            + L+ A +IFGGIR+IA+ A+++VP MAF+YLA+ALFV+  N+  +P+   LIF+SAFG
Sbjct: 181 ALTLVIAGIIFGGIRRIAKWADVLVPVMAFSYLAMALFVIGSNFSAIPETFGLIFRSAFG 240

Query: 244 LQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHPASQGYVQMLGV 303
           L++A AGG+G AI    + GVKRGLFSNEAG+GSAPN AA A     HP +QG VQ L V
Sbjct: 241 LEQAFAGGIGAAI----LMGVKRGLFSNEAGLGSAPNVAAVAE--VKHPVAQGIVQSLSV 294

Query: 304 FIDTIVICTATVAIILMSGEYVPHGELTGIELTQRALSSQVGDWGGIFIAFAIFFFAFTS 363
           FIDTI++C+ T  IIL+SG Y P  +  G+ LTQ A+++ VG+WG +F++ A+  F FT+
Sbjct: 295 FIDTIILCSCTALIILLSGVYEPGMDQAGVVLTQTAVAAVVGEWGRVFVSVALLLFVFTT 354

Query: 364 IIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAMADVSMGLMAIVN 423
           +I NY   E  L F     +  +V++R++ + +V++GS+  L TV+A ADV+MGL+AI N
Sbjct: 355 LIYNYYLGENALGFFT-EKRMPVVIYRILVVILVLWGSVQDLGTVFAFADVTMGLLAIAN 413

Query: 424 LVAILLLSGIVIKLAKDYNRQLDAG-KVPTFDANDYPELKSQLEDGIWDNN 473
           L+A+ LL  + ++L +DY+RQ+ AG + P  D  D+ +L   L+  +W  N
Sbjct: 414 LIAVALLFKVGLRLMRDYDRQIRAGIEQPVLDPKDFADL--DLDPAVWKAN 462