Pairwise Alignments

Query, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., Sodium:alanine symporter from Pseudomonas syringae pv. syringae B728a

 Score =  430 bits (1105), Expect = e-125
 Identities = 210/471 (44%), Positives = 320/471 (67%), Gaps = 9/471 (1%)

Query: 4   LINLMNDLLWGSILVYLLVGVGIYFTLRLGFIQFRHFTHTFTVLKNSRKADNAGISSFQA 63
           ++ ++ND L G +L+ L+VG+G YFT+R  F+QFRHF H F+V ++S ++    +SSFQA
Sbjct: 1   MLEMINDFLSGKVLIVLIVGLGSYFTIRSRFVQFRHFFHMFSVFRDSLRSSAGQLSSFQA 60

Query: 64  LCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKTRDKDG 123
           L  SLA RVG GN+AGV +A+T GGPGA+FWMW+ A++GMA+SF E +LAQLYK +D +G
Sbjct: 61  LMLSLAGRVGAGNIAGVGIAVTLGGPGAVFWMWVTALVGMASSFIECSLAQLYKRKDTEG 120

Query: 124 NYRGGPAYYMEKGLGMRWMGVLFSIFLIIAFGLVFNAVQANSITNAMKTAFGFEPMLIGI 183
            +RGGPA+Y++ GLG RW+G++ ++ L++ FG  FN +Q++++T+++K+AF  +    GI
Sbjct: 121 QFRGGPAFYIQHGLGKRWLGMVMAVLLLVTFGFAFNGLQSHAVTDSLKSAFNVDTRTTGI 180

Query: 184 GIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPDAISLIFKSAFG 243
            +V+L      GGI++IA  ++L+VP     Y+A+ ++V+V+  + VP  +  I +SAFG
Sbjct: 181 CLVVLLGLAFIGGIKRIAAISDLLVPVKTLIYIAVTIYVIVLQIDHVPGMLMTIVRSAFG 240

Query: 244 LQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHPASQGYVQMLGV 303
           L +   GGL   I  A++ GVKRG+F+NEAG+GSAPN AA A     HP +QG VQ   V
Sbjct: 241 L-DPVFGGL---IGSAIVMGVKRGVFANEAGLGSAPNVAAVA--QVEHPVAQGVVQAFSV 294

Query: 304 FIDTIVICTATVAIILMSGEYVPHGELTGIELTQRALSSQVGDWGGIFIAFAIFFFAFTS 363
           F+DT VICT T  +IL+SG Y    +  GI L Q +L++ VGDWG +FI+ A+  F FTS
Sbjct: 295 FLDTFVICTCTALLILLSGIYDIGYDGNGIVLAQNSLAAVVGDWGRVFISVALALFVFTS 354

Query: 364 IIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAMADVSMGLMAIVN 423
           I+ NY   E +L FL     + ++++R+  L ++M+G++  L  V A AD++M ++A VN
Sbjct: 355 ILYNYYLGENSLRFLFGEKMQTIIIYRIAVLVLIMWGAVVDLKDVLAFADITMTMLAFVN 414

Query: 424 LVAILLLSGIVIKLAKDYNRQLDAG-KVPTFDANDYPELKSQLEDGIWDNN 473
           L+A+ +L  +V ++  DY+ Q  AG K P FD++ +P+L   L+   W  N
Sbjct: 415 LIALAMLFKVVKRILNDYDAQRRAGVKTPVFDSSQFPDL--DLDRNAWPAN 463