Pairwise Alignments

Query, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 459 a.a., amino acid carrier protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  314 bits (804), Expect = 5e-90
 Identities = 183/464 (39%), Positives = 277/464 (59%), Gaps = 18/464 (3%)

Query: 1   MTDLINLMNDLLWGSILVYLLVGVGIYFTLRLGFIQFRHFTHTFTVLKNSR-----KADN 55
           +T+L+  +N L+WG  ++ +++GVG+Y +L L  +        F +L + R     K   
Sbjct: 4   VTELVKSLNSLVWGIPMLVMILGVGLYLSLGLKLLPILKLGKGFRLLWSGRTPGQGKEVK 63

Query: 56  AGISSFQALCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQL 115
             +S F AL TSL+A +GTGN+AGVA A+  GGPGA+FWMW  A++GMAT ++E+ LA  
Sbjct: 64  GDVSPFNALMTSLSATIGTGNIAGVATAIFVGGPGALFWMWCTALVGMATKYSEAVLAVR 123

Query: 116 YKTRDKDGNYRGGPAYYMEKGLGMR--WMGVLFSIFLIIAFGLVFNAVQANSITNAMKTA 173
           Y+  D+ GNY GGP YY++ GLG +  W+G  F++F   A   + N VQANS+ +A+ + 
Sbjct: 124 YREVDEKGNYIGGPMYYIKNGLGSKWTWLGTAFALFGSFAGFGIGNTVQANSVASALTSN 183

Query: 174 FGFEPMLIGIGIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPDA 233
           FG    + G+ +++L   V+ GGI++IA  A  +VP M   Y+   + V+V+   ++P A
Sbjct: 184 FGVPAWVSGVVMMVLVGLVLMGGIKRIAIVAGKLVPLMTIFYITAGIAVLVVYASEIPAA 243

Query: 234 ISLIFKSAFGLQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHPA 293
           +SLI  SAF    A  G  G A+  A+  GV RG+FSNEAG+GSAP A A+A      P 
Sbjct: 244 LSLIISSAFSPVAAQGGFAGAAVMVAIQMGVARGVFSNEAGLGSAPIAHAAA--QTKSPV 301

Query: 294 SQGYVQMLGVFIDTIVICTATVAIILMSGEYVPHGELTGIELTQRALSS--QVGDWGGIF 351
           +QG V MLG FIDTI++C+ T   I++SG +   GE  G  LT  A S    +GD+    
Sbjct: 302 TQGLVGMLGTFIDTIIVCSITGLAIVVSGAWT-SGE-NGAALTSYAFSHALPIGDY---I 356

Query: 352 IAFAIFFFAFTSIIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAM 411
           +A A+  FAFT+I+    Y+E  + +L     K ++ FRL++  +V  G++ +L  VW +
Sbjct: 357 VAVALAIFAFTTILGWSVYSEKCVQYL--LGVKAVMPFRLIWTLVVPLGAMGSLDFVWLL 414

Query: 412 ADVSMGLMAIVNLVAILLLSGIVIKLAKDYNRQLDAGKVPTFDA 455
           AD    +MAI NL+A+ LLS +V KL +++    D     + +A
Sbjct: 415 ADTLNAMMAIPNLIALALLSPVVFKLTREFFSSRDEASTKSVEA 458