Pairwise Alignments

Query, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., sodium/alanine symporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  252 bits (643), Expect = 2e-71
 Identities = 162/453 (35%), Positives = 241/453 (53%), Gaps = 33/453 (7%)

Query: 13  WGSILVYLLVGVGIYFTLRLGFIQFRHFTHTFTVLKNSR-KADNAG-ISSFQALCTSLAA 70
           WG  ++ LLVG G++F +  G   FR+  H   +++    +AD AG IS   AL +++A 
Sbjct: 21  WGPHMLVLLVGGGLFFLIYSGLAPFRYLKHAIDIVRGKYPEADAAGNISHAGALSSAMAG 80

Query: 71  RVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKTRDKDGNYRGGPA 130
            VG GN+ GVA+A+ AGGPGAIFWMW+ A++GMAT F   +LA +Y+  D+ G  RGGP 
Sbjct: 81  TVGMGNIGGVALAIVAGGPGAIFWMWVSALVGMATKFFTCSLAIMYRGTDETGRVRGGPM 140

Query: 131 YYMEKGLGMRW--MGVLFSIFLIIAFGLVFNAVQANSITNAMKTAFGFEP---------- 178
           Y +  GLG +W  + V F +  ++    +FN    N +   +K      P          
Sbjct: 141 YIITHGLGQKWKPLAVFFCLVGLVGNFPLFN---TNQLVQILKEYLFLSPGDTGVAVGSG 197

Query: 179 ------MLIGIGIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPD 232
                 + +G+ I+ L A VI GGI++IA  A  +VP M   Y+  AL+V++ +   VP 
Sbjct: 198 EHFALELGLGLAIMSLVALVILGGIKRIAAVAIRVVPTMILLYVGCALYVILSHLGDVPM 257

Query: 233 AISLIFKSAFGLQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHP 292
            +  I + AF +Q  A G LG      M+ GVKR  FSNEAG+G+      +A      P
Sbjct: 258 HLWRIVEDAFSVQSVAGGILG-----TMLTGVKRAAFSNEAGIGTEVMVHGNAK--TSEP 310

Query: 293 ASQGYVQMLGVFIDTIVICTATVAIILMSGEYVPHGELTGIELTQRALSSQVGDWGGIFI 352
             +G V MLG  IDT+++CTAT  IIL+SG +   G   GI L+  A ++ +   G   +
Sbjct: 311 VKEGLVAMLGPAIDTLLVCTATALIILISGVW-EQGGANGISLSSAAFAATMPGIGPYLL 369

Query: 353 AFAIFFFAFTSIIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAMA 412
              + FFA T+I     Y      FL    ++   L+  ++L  ++F +  +L  +  + 
Sbjct: 370 LVCVSFFAITTIFTQAFYGSQCFAFLFGARRERWYLY--LYLLAILFAATNSLTDIVNII 427

Query: 413 DVSMGLMAIVNLVAILLLSGIVIKLAKDYNRQL 445
           D + GLMAI  + A LLL+  V   AKDY R+L
Sbjct: 428 DGAYGLMAIPTMTAALLLAPRVRAAAKDYFRRL 460