Pairwise Alignments

Query, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., sodium:alanine symporter family protein from Methanococcus maripaludis S2

 Score =  334 bits (856), Expect = 4e-96
 Identities = 187/447 (41%), Positives = 269/447 (60%), Gaps = 17/447 (3%)

Query: 4   LINLMNDLLWGSILVYLLVGVGIYFTLRLGFIQFRHFTHTFTVL--KNSRKADNAGISSF 61
           L+N +N  +WG  ++ LL+G GI+ TLRLGF+Q     +   +   K+  +     IS F
Sbjct: 6   LVNTVNSFVWGPYMLVLLLGTGIFLTLRLGFMQIHTLPYALKLAFSKHQDETSEGDISHF 65

Query: 62  QALCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKTRDK 121
           QAL T+LAA +GTGN+AGVA A   GGPGAIFWMW+ A  GMAT +AE+ LA  Y+T D 
Sbjct: 66  QALMTALAATIGTGNIAGVATAYVLGGPGAIFWMWVTAFFGMATKYAEAVLAIKYRTVDD 125

Query: 122 DGNYRGGPAYYMEKGL---GM-RWMGVLFSIFLIIAFGLVFNAVQANSITNAMKTAFGFE 177
           +G   GGP Y++EKGL   G+ + +GV F+ F   A   + N VQ NS+ +A+ + FG +
Sbjct: 126 NGEMAGGPMYFLEKGLPDHGLGKILGVAFAFFGAFAAFGIGNMVQTNSVADAVASNFGVD 185

Query: 178 PMLIGIGIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPDAISLI 237
           P++ G  + + TA VI GGI+ I +   +IVPFMA  Y+   L ++ MN   +  A   I
Sbjct: 186 PLITGFVLAIFTAAVILGGIKSIGKATGIIVPFMAVFYILAGLVILAMNIGYIIPAFGTI 245

Query: 238 FKSAFGLQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHPASQGY 297
           F SAF      + G G  I  A++ GVKRG+FSNEAG+GSAP AAA+A     HP  Q  
Sbjct: 246 FSSAFNF----SAGFGALIGTAIMWGVKRGVFSNEAGLGSAPIAAAAAK--TDHPGRQAL 299

Query: 298 VQMLGVFIDTIVICTATVAIILMSGEYVPHG--ELTGIELTQRALSSQVGDWGGIFIAFA 355
           V M G F+DTIV+CT T  ++ ++G     G  +LTG  LT  +  + +   GG+ +   
Sbjct: 300 VSMTGTFLDTIVVCTITGLVLTIAGLKAFPGLTDLTGASLTAASFDALM-PMGGLIVTIG 358

Query: 356 IFFFAFTSIIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAMADVS 415
           + FFA+++++    Y E    +L     KG+ L+R+ F+ +  +G+ A+LP VW +AD  
Sbjct: 359 LVFFAYSTVLGWSYYGEKCFEYL--IGTKGIRLYRIAFVLVAFWGATASLPLVWNIADTL 416

Query: 416 MGLMAIVNLVAILLLSGIVIKLAKDYN 442
            G MAI NL+ +LLLSG+V+   K +N
Sbjct: 417 NGAMAIPNLIGLLLLSGVVVSETKAFN 443