Pairwise Alignments

Query, 476 a.a., sodium:alanine symporter family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 488 a.a., amino acid carrier protein (RefSeq) from Shewanella sp. ANA-3

 Score =  625 bits (1612), Expect = 0.0
 Identities = 308/473 (65%), Positives = 373/473 (78%), Gaps = 2/473 (0%)

Query: 4   LINLMNDLLWGSILVYLLVGVGIYFTLRLGFIQFRHFTHTFTVLKNSRKADNAGISSFQA 63
           ++N +N LLWG +LVY LVG G+YFTLRL FIQ  HF H+  V+  SR+   +G+SSFQ 
Sbjct: 5   IVNFLNALLWGKLLVYGLVGAGLYFTLRLVFIQLTHFKHSLKVMTMSRQGCESGLSSFQV 64

Query: 64  LCTSLAARVGTGNMAGVAVALTAGGPGAIFWMWLIAMLGMATSFAESTLAQLYKTRDKDG 123
            CTS+AARVG GNMAGVAVA+ A GPGA+FWMWLIAMLGMAT+  ESTLAQ+YK RD +G
Sbjct: 65  FCTSMAARVGAGNMAGVAVAIGAAGPGAVFWMWLIAMLGMATAMVESTLAQVYKVRDTNG 124

Query: 124 NYRGGPAYYMEKGLGMRWMGVLFSIFLIIAFGLVFNAVQANSITNAMKTAFGFEPMLIGI 183
            +RGGP+YYMEKGLG RWMGVLF+ FLIIAFGLVFNAVQAN+IT AM+  FGF P  +GI
Sbjct: 125 QFRGGPSYYMEKGLGQRWMGVLFAFFLIIAFGLVFNAVQANTITGAMERVFGFNPTYVGI 184

Query: 184 GIVLLTAFVIFGGIRKIARTAELIVPFMAFAYLAIALFVVVMNYEKVPDAISLIFKSAFG 243
           G+VL + FVI GG+RK+AR +E IVP MA AY+ IA  +V+ N +++P  ISLI KSAFG
Sbjct: 185 GLVLASGFVIVGGLRKVARVSEFIVPIMALAYILIAFIIVLFNLDQLPAIISLIVKSAFG 244

Query: 244 LQEAAAGGLGYAIAQAMINGVKRGLFSNEAGMGSAPNAAASATPYPPHPASQGYVQMLGV 303
            QEAAAGG+ Y +AQAM  G+ RGLFSNEAGMGSA N AASA+P P HPASQG+VQM+GV
Sbjct: 245 WQEAAAGGVAYTVAQAMQAGIARGLFSNEAGMGSAANVAASASPNPNHPASQGFVQMMGV 304

Query: 304 FIDTIVICTATVAIILMSGEYVPHGELTGIELTQRALSSQVGDWGGIFIAFAIFFFAFTS 363
           F+DTIVICTAT AIIL+SG+     +  GI LT  A+S+ VGDWGG FIA AIF F FTS
Sbjct: 305 FVDTIVICTATAAIILLSGDIGSSED--GIRLTINAMSNHVGDWGGAFIAIAIFLFCFTS 362

Query: 364 IIANYSYAETNLIFLEHNNKKGLVLFRLVFLGMVMFGSLATLPTVWAMADVSMGLMAIVN 423
           IIANYSYAETN++FL  N+ K L LFRL  LGMVMFG++A +  VW +ADVSMGLMA VN
Sbjct: 363 IIANYSYAETNVMFLTGNSTKALPLFRLCVLGMVMFGAVAKISLVWNLADVSMGLMATVN 422

Query: 424 LVAILLLSGIVIKLAKDYNRQLDAGKVPTFDANDYPELKSQLEDGIWDNNKAS 476
           ++A+LLLSG+ I++  DY  QL +GK+P FD + +PEL  QL+DGIW +N A+
Sbjct: 423 IIALLLLSGLAIRVINDYCEQLKSGKMPEFDRSKFPELMEQLDDGIWQDNSAN 475