Pairwise Alignments

Query, 283 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., Putative deoxyribonuclease YjjV from Pseudomonas fluorescens FW300-N2E2

 Score =  186 bits (473), Expect = 4e-52
 Identities = 103/257 (40%), Positives = 158/257 (61%), Gaps = 6/257 (2%)

Query: 22  LFDTHCHFDFPPFTATPELELQKAAQHGVRRLVVPSIGPQDWQAVTELAQRFPSTIYYAL 81
           L DTH H DFP F A     L ++   GVR++VV  +   +WQ V +L Q  P  ++ AL
Sbjct: 3   LIDTHTHLDFPDFDADRPALLAESRALGVRQMVVLGVYRDNWQRVWDLVQSDPD-LHAAL 61

Query: 82  GFHPLYLDASSPTHLPALEKALMQA---EQACVAVGECGLDGMID-VDVALQEQMLIAQL 137
           G HP+YLD   P  +  L + L +     Q C AVGE GLD  I+ +D   Q+ +  AQL
Sbjct: 62  GLHPVYLDQHRPDDVALLREWLSRLAGHRQLC-AVGEIGLDYYIETLDRERQQTLFEAQL 120

Query: 138 SMASQAKLPVILHSRRTHNRLLQLLKQQRFQQGGVLHAFSGSVQEAQQFVDLGFKIGVGG 197
            +A++ +LP ++H RR+H  ++  LK+   ++ G++HAF+GS++EA++++ LGFK+G+GG
Sbjct: 121 QLAAEFELPALIHVRRSHAAVIATLKRFGLKRTGIIHAFAGSLEEAREYIKLGFKLGLGG 180

Query: 198 VITYPRANKTRQAIAALPVEHIVLETDAPDMPLNGFQGQANHPAQLAKVLETLAELKGVS 257
             T+P+A +  + +A LP++ +VLETD+PDM    F GQ N PA L  + E LA++  V 
Sbjct: 181 AATWPQALRMHRVLAKLPLDAVVLETDSPDMAPAMFPGQRNSPAHLPAICEALAQIMTVR 240

Query: 258 AQYLAPILWQNSQMLFG 274
            + LA     N++ LFG
Sbjct: 241 PEQLAEASTTNARDLFG 257