Pairwise Alignments

Query, 283 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., Putative deoxyribonuclease YjjV from Pseudomonas fluorescens FW300-N1B4

 Score =  184 bits (467), Expect = 2e-51
 Identities = 104/256 (40%), Positives = 151/256 (58%), Gaps = 6/256 (2%)

Query: 22  LFDTHCHFDFPPFTATPELELQKAAQHGVRRLVVPSIGPQDWQAVTELAQRFPSTIYYAL 81
           L DTH H DFP F    +  L ++   GVRR+VV  +   +WQ V +L Q  P  ++ A 
Sbjct: 3   LIDTHTHLDFPDFDVDRQALLAESRALGVRRMVVLGVYQANWQRVWDLVQSDPD-LHAAF 61

Query: 82  GFHPLYLDASSPTHLPALEKALMQA---EQACVAVGECGLDGMID-VDVALQEQMLIAQL 137
           G HP+YLD   P  L  L   L +     Q C AVGE GLD  I+ +D   Q+ +  AQL
Sbjct: 62  GLHPVYLDDHRPEDLTELGDWLTRLAGHRQLC-AVGEIGLDYFIETLDRERQQALFDAQL 120

Query: 138 SMASQAKLPVILHSRRTHNRLLQLLKQQRFQQGGVLHAFSGSVQEAQQFVDLGFKIGVGG 197
            +A+   LP ++H RR+H  ++  LK+ R ++ G++HAF+GS +EA++++ LGFK+G+GG
Sbjct: 121 QLAADFNLPALIHVRRSHAAVIATLKRFRLKRAGIIHAFAGSQEEAREYIKLGFKLGLGG 180

Query: 198 VITYPRANKTRQAIAALPVEHIVLETDAPDMPLNGFQGQANHPAQLAKVLETLAELKGVS 257
             T+P+A +  + +A LP+E +VLETD+PDM    F GQ N PA L  +   LA +  VS
Sbjct: 181 AATWPQALRMHRVLAGLPLESVVLETDSPDMAPAMFPGQRNSPAHLPAICAALAAIMAVS 240

Query: 258 AQYLAPILWQNSQMLF 273
            + LA     N+  LF
Sbjct: 241 PERLASASTTNACELF 256