Pairwise Alignments

Query, 283 a.a., TatD family deoxyribonuclease from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., 3'-5' ssDNA/RNA exonuclease TatD from Pantoea sp. MT58

 Score = 96.7 bits (239), Expect = 5e-25
 Identities = 69/261 (26%), Positives = 125/261 (47%), Gaps = 9/261 (3%)

Query: 22  LFDTHCHFDFPPFTATPELELQKAAQHGVRRLVVPSIGPQDWQAVTELAQRFPSTIYYAL 81
           +FD   +     F +  +  +++A   GV  +++      + Q    LA+  P   +   
Sbjct: 1   MFDIGVNLTSTQFASDRQKVVKRARDAGVTGMLITGTNALESQQAQRLAEAQPDFCWSTA 60

Query: 82  GFHPLYLDASSPTHLPALEKALMQAEQACVAVGECGLDGMIDVDVALQEQMLI-AQLSMA 140
           G HP +    S      L +   + E   VA+GECGLD   ++    Q++    AQL++A
Sbjct: 61  GVHPHHASEWSTDIASTLRRLAEKTE--VVAIGECGLDFNRNLSAHEQQEYAFDAQLALA 118

Query: 141 SQAKLPVILHSRRTHNRLLQLLKQQRFQ-QGGVLHAFSGSVQEAQQFVDLGFKIGV-GGV 198
           ++  +PV LH R  H R   +L+    +  G V+H F+G+  E +  + +G  +G+ G V
Sbjct: 119 AELNMPVFLHCREAHARFAAVLEPWLPKLPGAVIHCFTGTRDELEGCLAMGLSVGITGWV 178

Query: 199 ITYPRANKTRQAIAALPVEHIVLETDAPDMPLNGFQ----GQANHPAQLAKVLETLAELK 254
               R  + R+ +  +P + ++LETDAP +     +     + N P  L  ++  +A  +
Sbjct: 179 CDERRGLELRELLPLIPADRLLLETDAPYLLPRDMRPRPTSRRNEPCFLPHIVHQVATWR 238

Query: 255 GVSAQYLAPILWQNSQMLFGL 275
           G +A+ LA  + QN++ LF L
Sbjct: 239 GENAEELAVRIDQNARTLFRL 259