Pairwise Alignments

Query, 418 a.a., NupC/NupG family nucleoside CNT transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., nucleoside transporter (RefSeq) from Shewanella loihica PV-4

 Score =  545 bits (1405), Expect = e-160
 Identities = 284/426 (66%), Positives = 339/426 (79%), Gaps = 17/426 (3%)

Query: 1   MSLFMSLIGMAVLLGIAVLLSSNRKAINLRTVGGAFAIQFSLGAFILYVPWGQELLRGFS 60
           M + MSL+G+ VLL I  LLS+N+KAIN+RTV GA AIQ     F+LYVP G+++L+  S
Sbjct: 1   MDILMSLVGVVVLLAIGFLLSNNKKAINMRTVFGALAIQAFFAGFVLYVPIGKDILKSVS 60

Query: 61  DAVSNVINYGNDGTSFLFGGLVSGKMFEVFGGGGFIFAFRVLPTLIFFSALISVLYYLGV 120
           D VS+VI Y  +G  FLFG L + K+       GFIFA  VLP ++FFS+LI+VLYYLG+
Sbjct: 61  DGVSSVIGYAQNGIGFLFGDLANFKV-------GFIFAINVLPVIVFFSSLIAVLYYLGI 113

Query: 121 MQWVIRILGGGLQKALGTSRAESMSAAANIFVGQTEAPLVVRPFVPKMTQSELFAVMCGG 180
           MQW+IRI+GGGLQKALGTSR ESMSA ANIFVGQTEAPLVVRPF+  MTQSELFA+M GG
Sbjct: 114 MQWIIRIIGGGLQKALGTSRTESMSATANIFVGQTEAPLVVRPFIATMTQSELFAIMVGG 173

Query: 181 LASIAGGVLAGYASMGVKIEYLVAASFMAAPGGLLFAKLMMPETEKPQDNEDITLDGGDD 240
           LASIAG VLAGYA MGV IEYLVAASFMAAPGGLL AKLM PETEK   NE   L    D
Sbjct: 174 LASIAGSVLAGYAQMGVPIEYLVAASFMAAPGGLLMAKLMHPETEKTV-NEMDELPEDPD 232

Query: 241 KPANVIDAAAGGASAGLQLALNVGAMLIAFIGLIALINGMLGGIGGWFGMPELKLEMLLG 300
           KPANV+DAAA GAS+G+ LALNVGAML+AF+GLIA+ING++GG+ G FG   + LE++LG
Sbjct: 233 KPANVLDAAAAGASSGMHLALNVGAMLLAFVGLIAMINGIIGGVTGLFGAEGITLELILG 292

Query: 301 WLFAPLAFLIGVPWNEATVAGEFIGLKTVANEFVAYSQFAPY---------LTEAAPVVL 351
           ++F PLAFLIGVPWNEA +AG FIG K V NEFVAY  FAPY         L EA   V+
Sbjct: 293 YIFMPLAFLIGVPWNEALIAGSFIGQKIVVNEFVAYLNFAPYLKDVADGGLLVEATNAVM 352

Query: 352 SEKTKAIISFALCGFANLSSIAILLGGLGSLAPKRRGDIARMGVKAVIAGTLSNLMAATI 411
           +++TKAIISFALCGFANLSSIAILLGGLG++AP RR D+A++G++AVIAG+L+NLM+AT+
Sbjct: 353 TDRTKAIISFALCGFANLSSIAILLGGLGAMAPTRRHDLAKLGIRAVIAGSLANLMSATL 412

Query: 412 AGFFLS 417
           AG FL+
Sbjct: 413 AGLFLA 418