Pairwise Alignments

Query, 418 a.a., NupC/NupG family nucleoside CNT transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 426 a.a., nucleoside permease nupC from Caulobacter crescentus NA1000

 Score =  260 bits (664), Expect = 6e-74
 Identities = 147/415 (35%), Positives = 246/415 (59%), Gaps = 13/415 (3%)

Query: 6   SLIGMAVLLGIAVLLSSNRKAINLRTVGGAFAIQFSLGAFILYVPWGQELLRGFSDAVSN 65
           +L G+A+ LG+  L+S NRK        GA  IQ  L   +  +P  Q++LRG + AV  
Sbjct: 9   ALAGLALTLGLCWLVSENRKRFPWGLAIGAVVIQVLLVLVLFGLPQAQQMLRGVNGAVEG 68

Query: 66  VINYGNDGTSFLFGGLVSGKM-FEVFG-GGGFIFAFRVLPTLIFFSALISVLYYLGVMQW 123
           +      GT+F+FG L  G   + V   G GFIFAFRVLP ++   AL ++L++  +++W
Sbjct: 69  LAASTQAGTAFVFGFLAGGDQPYPVSNPGAGFIFAFRVLPVILVVCALSALLWHWKILKW 128

Query: 124 VIRILGGGLQKALGTSRAESMSAAANIFVGQTEAPLVVRPFVPKMTQSELFAVMCGGLAS 183
           + +  G   QK LG     +++ AA IF+GQ E P+ +R ++ K+++SELF ++  G+A 
Sbjct: 129 LAQGFGFVFQKTLGLRGPPALATAATIFMGQVEGPIFIRAYLDKLSRSELFMLIAVGMAC 188

Query: 184 IAGGVLAGYASMGVKI-----EYLVAASFMAAPGGLLFAKLMMPETEKPQDNEDITLDGG 238
           ++G  +  YA++   +      +++ AS ++AP G+L A++++P ++  + + D+ L   
Sbjct: 189 VSGSTMVAYATILADVLPNAAAHVLTASIISAPAGVLLARIIVP-SDPMEKSADLDLSTE 247

Query: 239 DDKPANVIDAAAGGASAGLQLALNVGAMLIAFIGLIALINGMLGGIGGWFGMPELKLEML 298
           D    + IDA   G + GLQ+ALNVGA LI F+ L  +++ +LG      G P L +   
Sbjct: 248 DKTYGSSIDAVMKGTTDGLQIALNVGATLIVFVALATMVDKVLGAFPPVGGEP-LSIARG 306

Query: 299 LGWLFAPLAFLIGVPWNEATVAGEFIGLKTVANEFVAYSQFAPYLTEAAPVVLSEKTKAI 358
           LG +FAPLA+ +G+PW EA  AG  +G+K +  EF A+ Q    L++    +L E+T+ I
Sbjct: 307 LGVVFAPLAWSMGIPWKEAGTAGGLLGVKLILTEFTAFIQ----LSKVGEALLDERTRMI 362

Query: 359 ISFALCGFANLSSIAILLGGLGSLAPKRRGDIARMGVKAVIAGTLSNLMAATIAG 413
           +++ALCGFAN+ S+ + + G   L P+RR ++  +  KA++AG L+  + A++ G
Sbjct: 363 MTYALCGFANIGSVGMNVAGFSVLVPQRRQEVLGLVWKAMMAGFLATCLTASLVG 417