Pairwise Alignments

Query, 448 a.a., thymidine phosphorylase from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., putative thymidine phosphorylase from Pseudomonas stutzeri RCH2

 Score =  125 bits (314), Expect = 3e-33
 Identities = 112/415 (26%), Positives = 194/415 (46%), Gaps = 27/415 (6%)

Query: 2   SLSQAKYLPQ-EIIRRKRDGEVLTNDEINFFIQGVANNTVSEGQIAAFAMAIFFREMTMP 60
           S+SQA+       + RK  GE L  ++    ++ +A +  S+ ++ AF +A    E+   
Sbjct: 99  SISQAEPAASIPALHRKIAGERLRREDFLAIMRDIAEHRYSKIELTAFVVACNQGELDRE 158

Query: 61  ERIALTCAMRDSGMVIDWSHMNFDGPIVDKHSTGGV-GDVTSLMLGPMVAACGGYVPMIS 119
           E   LT AM   G  +DW     + P+VDKH  GG+ G+ TS+++ P+VAA G   P  S
Sbjct: 159 EVFFLTDAMIQVGRRLDWR----EHPVVDKHCIGGIPGNRTSMLVVPIVAAHGMLCPKTS 214

Query: 120 GRGLGHTGGTLDKLEAIPGYNITPTNDVFGKVTKQAGVAIIGQTGDLAPADKRVYATRDI 179
            R +    GT D +E +    + P   +   V ++ G    G T +L+PAD  + A  + 
Sbjct: 215 SRAITSPAGTADTMEVLANVEL-PFERLCEMVREERGCLAWGGTSELSPADDVLIAV-ER 272

Query: 180 TATVDNISLITASILSKKLAAGLESLVMDVKVGSGAFMPTYEASEELAKSIVAVANGAGT 239
             ++D+   + ASILSKK+AAG   L++D+ +G  A + +   ++ L K    VA+  G 
Sbjct: 273 PLSIDSPGQMVASILSKKIAAGSTHLLLDIPIGPTAKVRSMAEAQRLRKLFEFVASRLGL 332

Query: 240 NTTAILTDMNQVLASSAGNAVEVREAVRFLTGEYRNP-RLLEVTMASCAEMLVLG---KL 295
               ++TD  Q + +  G  +E R+ ++ L  +   P  L +  +     ML      + 
Sbjct: 333 TLDVVITDGRQPIGNGIGPVLEARDVMQVLQNDPAAPIDLRQKALRLAGRMLEFDPDVRG 392

Query: 296 AKDTAQAREKLQAVLDNGQAADRFGKMVAGLGGPSDFVENYDKYLAKAEIIRPVYAQQSG 355
               A AR+    +LD+G+A  +   ++A  G    F  N+      A +   V A++S 
Sbjct: 393 GDGYAIARD----ILDSGRALKKMHSIIAAQGS-KPFDHNHPPL---ARLSFDVLAERSA 444

Query: 356 VISAMDTRAIGMAVVGMGGGRRVATDRIDYAVGFDQFIRLGEIADSNKPLAMIHA 410
           V++ +D   +   +  + G  +V         G D   +LGE   +   L  ++A
Sbjct: 445 VVTGIDNLQLA-RIARLAGAPKV------QGAGVDILRKLGEPVQAGDCLYRVYA 492