Pairwise Alignments

Query, 448 a.a., thymidine phosphorylase from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., thymidine phosphorylase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  581 bits (1498), Expect = e-170
 Identities = 293/443 (66%), Positives = 355/443 (80%), Gaps = 3/443 (0%)

Query: 8   YLPQEIIRRKRDGEVLTNDEINFFIQGVANNTVSEGQIAAFAMAIFFREMTMPERIALTC 67
           +L QEIIR+KR+G VL+ +EI FF++G+  N VSEGQIAA  MA++F +M M ERIALT 
Sbjct: 2   FLAQEIIRKKRNGLVLSAEEIQFFVKGITTNAVSEGQIAALGMAVYFNDMNMDERIALTT 61

Query: 68  AMRDSGMVIDWSHMNFDGPIVDKHSTGGVGDVTSLMLGPMVAACGGYVPMISGRGLGHTG 127
           AMRDSG V++W  +N +GP++DKHSTGGVGDV SLMLGPM AACGGYVPMISGRGLGHTG
Sbjct: 62  AMRDSGTVLNWQSLNLNGPVIDKHSTGGVGDVISLMLGPMAAACGGYVPMISGRGLGHTG 121

Query: 128 GTLDKLEAIPGYNITPTNDVFGKVTKQAGVAIIGQTGDLAPADKRVYATRDITATVDNIS 187
           GTLDK +AIPGY   P++++F KV K  GVAIIGQTGDL PADKR Y+ RD TATV++IS
Sbjct: 122 GTLDKFDAIPGYQTEPSSELFRKVVKDVGVAIIGQTGDLVPADKRFYSIRDNTATVESIS 181

Query: 188 LITASILSKKLAAGLESLVMDVKVGSGAFMPTYEASEELAKSIVAVANGAGTNTTAILTD 247
           LITASILSKKLA  L++L MDVKVGSGAFMPTYEASEELA+SI AVANGAGT TTA+LTD
Sbjct: 182 LITASILSKKLACSLDALAMDVKVGSGAFMPTYEASEELARSIAAVANGAGTKTTALLTD 241

Query: 248 MNQVLASSAGNAVEVREAVRFLTGEYRNPRLLEVTMASCAEMLVLGKLAKDTAQAREKLQ 307
           MNQVLAS AGNA+EV+EA+ FLTG YRNPRL  VTM  CAEML+LG LA D A AR KL 
Sbjct: 242 MNQVLASCAGNALEVKEAIDFLTGAYRNPRLYAVTMGLCAEMLLLGGLATDEADARAKLN 301

Query: 308 AVLDNGQAADRFGKMVAGLGGPSDFVENYDKYLAKAEIIRPVYAQQSGVISAMDTRAIGM 367
            VLDNG+AA+ FGKMV+GLGGP DFVENY KYL +++IIRPV+A   G   +MDTR +G+
Sbjct: 302 RVLDNGRAAEIFGKMVSGLGGPVDFVENYSKYLPQSQIIRPVFADTQGYAHSMDTRELGL 361

Query: 368 AVVGMGGGRRVATDRIDYAVGFDQFIRLGEIADSNKPLAMIHARNEEQWQQAANALQSAI 427
           AVV +GGGRR   D +DY+VG  Q   LG+  D++ P+A+IHA++EE + QA +A++ AI
Sbjct: 362 AVVTLGGGRRKPGDELDYSVGLTQVCALGDKIDASTPIAVIHAQSEEAFAQAEDAVKKAI 421

Query: 428 KVGGDYLP--TPDVYRQIRAQDV 448
            +  +  P  TP++Y  IRA D+
Sbjct: 422 HI-DEIAPEKTPEIYAYIRATDL 443