Pairwise Alignments

Query, 207 a.a., SMP protein from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., membrane protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 46.2 bits (108), Expect = 6e-10
 Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 6/172 (3%)

Query: 11  VVRVATVLAVAVMFFITIQNSVVISKGNERIQANQLETLTKVLITQAAMSAGSMIADQDQ 70
           ++++A  LA+        Q+S++     +++  +Q E + ++L+ Q A  A   +  Q+ 
Sbjct: 28  LLQIAIALALLAGLVQLWQSSLL---QGQQLLKSQTEKMARLLVQQTAYGAAPALLLQND 84

Query: 71  ERLLALTNQLATDRLVFDASIYDSEGVLLAASESALSVREVLGLDTP-LHTASIGRQQLV 129
           E+L  L   L  D  V  A+IY  +G  L+ ++S  S  E L  D+  L          V
Sbjct: 85  EQLQWLATALVEDPKVMAAAIYGEQGTRLSFAQSLSS--EWLEPDSEELKDLLAPFPPYV 142

Query: 130 EPVVHDGSLIGFVRITFETGKVTAISDHHYRKSDHNMYWMLLMSFVSGILLT 181
           EPV+     +G+V +  E     A  +  ++ +      MLL++ + G+LL+
Sbjct: 143 EPVMQGDRNLGYVEVRLEPKLFLAEIEEAHKLNMEQQQIMLLVAGLIGMLLS 194