Pairwise Alignments

Query, 779 a.a., PilZ domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 790 a.a., type IV pilus assembly PilZ (RefSeq) from Shewanella sp. ANA-3

 Score =  285 bits (730), Expect = 5e-81
 Identities = 219/789 (27%), Positives = 377/789 (47%), Gaps = 33/789 (4%)

Query: 8   SLVERLIPVYRSGDLDYLLSQMTEGHPPSAKLLVKMELNRLMAPCTKSIDLRGKVQGECR 67
           +L+E+L P+    +   +  Q+T     S + L+KMELNRL +PCT+ IDLR K +  C 
Sbjct: 8   ALIEQLKPLLMEPNFQEIFQQLTADENNSTRFLLKMELNRLASPCTRIIDLRDKSELPCT 67

Query: 68  EYHFDGRQHWLDDVAFNSYQKSLKKF-GAYTEGVWEAVNNTRNNFRVMKQQGKLDPKTDQ 126
           E     ++H+LD+ A +S Q ++  +   YT GV+E V N     R   +Q    P   +
Sbjct: 68  EVMLGQQRHFLDEPAKHSLQAAMSLYRNKYTLGVYEYVINAHQQRRQKLRQVTQQPDGIE 127

Query: 127 PKDTSFEVEPVKLGYDLKRQENRLKISSQIEIHLKNEQLVHGLSVDLSPSGAKLKVPAAF 186
           P+   F V  V LG    R E R+  S +I +       + G++VDLS  GA++++ A  
Sbjct: 128 PEP--FMVPGVVLGSYFNRAEERMNYSIRIAVSQPGRTEMPGITVDLSVGGARIRLAANH 185

Query: 187 DYKLGEVIQVYFSDLNKTSNVVGLHKSIDYRILGVDESYDSDAIKFLRVLKLSDTDVIEK 246
            + L + ++V   +L++      L   +DY+I  VD   + + I +LR+ ++  TD + +
Sbjct: 186 PFDLDKPLKVKLLELSEEYYYPDLQLGVDYQI--VDSQTNGEFI-WLRLRRIGGTDALGE 242

Query: 247 VIEEAIQTNTQKARHDNQDKIIRARTRGYEHMYLKHTCNLPLFFSGNELKLA--LLTENN 304
           ++   I+    + + D  D ++ A   G+E  YL H  +LPLF S     ++  LL+ +N
Sbjct: 243 MLGNLIRGYKLRYKLDVNDVLVTASGLGFERHYLPHLPHLPLFLSQQSQSISHMLLSRDN 302

Query: 305 RPIWQYWHDERNQQALGTLFKPERMAHLTAPGVRGSNNVLYAFKHEHQHKTLFFSMLMPE 364
           + I  Y+ DE +   L  +  P R++ L          + ++F +  Q    F+S  + E
Sbjct: 303 QQIVHYFQDENDISQLPAMLTPARLSALVNHPENPDYGLFFSFTYNAQGSLYFYSATLAE 362

Query: 365 ATQE-QRKLFWHIGAKRDSWKAFRLF---VFELSDEERKTL----AEHSRELADQSRSLT 416
              +    LF    + + SW+ F+L    ++      R TL    A++S  +  Q    +
Sbjct: 363 LKAKGMTSLFLGFASTKPSWRIFKLIPDKIYHAKGYRRATLPGDDAKYSPLVEQQLSQFS 422

Query: 417 HCGVLQEISDTEAAHDYLLVEKPNLPSSALNDFRHPRQVVGTPMGIYFDARSRRKEPRYR 476
           H   L ++++ +    Y   +  +  ++AL  F   R        +      RR+E R+ 
Sbjct: 423 HMLQLIDLTNEDERASYKAWQDDS-NANALKAFGQQRLTAHQIKPVSMQFSERRQEARFA 481

Query: 477 FSTPVQVSIDALKVTGATVDLSKRGLSLLLDTPLDVKANDQVWVDYLELKLYDKSLPLDK 536
           F T V VS  ALK TG ++D+S RG+ L LD P +   N  + +   +L+       LD 
Sbjct: 482 FKTLVNVSQGALKATGISLDISGRGMQLTLDNPTEFATNKPIMISLPKLQTIAGKTQLDN 541

Query: 537 APYKVVRIGPEGRRLQLVIEENLQTLKTIAFFNSIIEHNQDKLLIKEEILPSNA----LL 592
            PY++VR    G  L L           + F N +I HN++KL   E++  +N+    L 
Sbjct: 542 LPYRLVRTRKNGVTLHLAAVMGHTPHVGVEFLNKLIAHNREKL---EQLTENNSEIKELA 598

Query: 593 ESLHNILLDKMVSTPFFVEKVGSNLKPKVIGVNYPLPPHLALLAKLGSEN-RITLQPIFK 651
           + L NILL ++ S P+FVEK   + +   +GV+        + A   S+  +  L P+ K
Sbjct: 599 DGLKNILLRELHSVPYFVEKTTKSAQVACLGVSTEHDEISDIFAAGSSDTLQYNLAPLLK 658

Query: 652 -GHTNSLLATPMKRIEGAVPQ----YHEVYLSAVKYGTRIQSVESRLLSDFADTRERIRF 706
            G     +  P+++++   PQ    + EV++   +       ++    ++  D + +I F
Sbjct: 659 DGFFKRDILDPIRQMK---PQQDMDFIEVFIQLTRQSRGQFHLKCVPATELGDAQAKIAF 715

Query: 707 IRQGQAMGEFYALRVSGVPVFAPITNLLRSDLTELAEISPHHAKSLEKEMLAQVGYGELV 766
           I Q +  G F ALR+       P    LR +L  +   + H AK LE+++   +G GEL+
Sbjct: 716 INQSKLAGRFMALRIYRGATEKPDMGYLRRELEYINIHANHRAKQLEEQLWRIIGVGELL 775

Query: 767 DITEEVLIR 775
           DIT+EV +R
Sbjct: 776 DITQEVELR 784