Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., DNA repair protein RadA from Pseudomonas fluorescens FW300-N2E2

 Score =  568 bits (1463), Expect = e-166
 Identities = 277/457 (60%), Positives = 359/457 (78%), Gaps = 2/457 (0%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAK 60
           M KAKR Y C ECG+ FP+W GQC+ CG+WN+++E  + +    A   R  G+AG  +A+
Sbjct: 1   MAKAKRMYGCTECGSTFPKWAGQCSECGAWNTLTETMVESGGAAAPTGR-TGWAGQ-QAQ 58

Query: 61  VQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSGQ 120
           ++TLA++ ++E+PRF++   ELDRVLGGG+V G+ +LIGG+PG GKST+LLQT+C L+ +
Sbjct: 59  IKTLAEVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNLATR 118

Query: 121 MPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQVM 180
           MP LYVTGEES QQVAMRA RLGLP+  L++++ET ++ I   A  EKP++MVIDSIQ +
Sbjct: 119 MPALYVTGEESQQQVAMRARRLGLPQDQLRVMTETCIETIIATARLEKPKVMVIDSIQTI 178

Query: 181 HVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSIL 240
               +QS+PG V+QVRESA  L RYAKQ+  A+F+VGHVTK+G LAGP+VLEH++D  + 
Sbjct: 179 FTEQLQSAPGGVSQVRESAALLVRYAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLY 238

Query: 241 LDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSVMV 300
            +G++D R R LR+ KNRFGAVNELGVF MT +G++EVSNPSAIFL+R +E   GS VM 
Sbjct: 239 FEGESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLTRAQEEVPGSVVMA 298

Query: 301 VWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVNV 360
            WEGTRP+LVE+QALVD S LANPRRV +GL+QNRL++LLAVLH+HGG+   DQDVF+NV
Sbjct: 299 TWEGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGGIPTHDQDVFLNV 358

Query: 361 VGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFKH 420
           VGGVKV ET++DLAL+ A++SS R+RPLP D++VFGEVGL+GE+RPVPSGQERL EA KH
Sbjct: 359 VGGVKVLETASDLALMAAVMSSLRNRPLPHDLLVFGEVGLSGEVRPVPSGQERLKEAAKH 418

Query: 421 GFKKAIVPIANMPKGGIEGMQIHGVKKLSDAIAAFDE 457
           GFK+AIVP  N PK    G+QI  V +L  A+ A  E
Sbjct: 419 GFKRAIVPKGNAPKEAPPGLQIIAVTRLEQALDALFE 455