Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., DNA repair protein RadA from Pseudomonas stutzeri RCH2

 Score =  557 bits (1435), Expect = e-163
 Identities = 276/458 (60%), Positives = 353/458 (77%), Gaps = 6/458 (1%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRL-AASPQVARNERLVGYAGALEA 59
           M KAKR Y C ECG+ FP+W GQC  CG+WN++ E  +  A+P   R     G+AG  +A
Sbjct: 1   MAKAKRMYGCTECGSTFPKWAGQCGDCGAWNTLVETVIEGAAPPSGR----AGWAGE-QA 55

Query: 60  KVQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSG 119
            ++TLA++ ++EVPRF++   ELDRVLGGG+V G+ +LIGG+PG GKST+LLQT+C ++ 
Sbjct: 56  NIRTLAEVSVEEVPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCAIAQ 115

Query: 120 QMPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQV 179
             P LYVTGEES QQVAMRA RL LP+  LK+++ET ++ I   A  EKP++MVIDSIQ 
Sbjct: 116 HYPALYVTGEESQQQVAMRARRLDLPQDKLKVMTETCIESIIATARLEKPKVMVIDSIQT 175

Query: 180 MHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSI 239
           +    +QS+PG VAQVRESA  L R+AKQ+  A+F+VGHVTK+G LAGP+VLEH++D  +
Sbjct: 176 IFTEQLQSAPGGVAQVRESAALLVRFAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVL 235

Query: 240 LLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSVM 299
             +G++D R R LR+ KNRFGA+NELGVF MT +G++EV+NPSAIFL+R +EA  GS VM
Sbjct: 236 YFEGESDGRLRLLRAVKNRFGAINELGVFGMTDKGLKEVTNPSAIFLTRAQEAVPGSVVM 295

Query: 300 VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN 359
             WEGTRP+LVE+QALVD S LANPRRV +GL+QNRL++LLAVLH+HG +   DQDVF+N
Sbjct: 296 ATWEGTRPMLVEVQALVDTSHLANPRRVTLGLDQNRLAMLLAVLHRHGSIPTYDQDVFIN 355

Query: 360 VVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK 419
           VVGGVKV ET+ADLAL+ A++SS R+RPL  D++VFGEVGL+GEIRPVPSGQERL EA K
Sbjct: 356 VVGGVKVLETAADLALMAAVISSLRNRPLDTDLLVFGEVGLSGEIRPVPSGQERLKEAAK 415

Query: 420 HGFKKAIVPIANMPKGGIEGMQIHGVKKLSDAIAAFDE 457
           HGFK+AIVP  N PK    G+QI  V +L  A+ A  E
Sbjct: 416 HGFKRAIVPKGNAPKEAPAGLQIIAVTRLEQALDALFE 453