Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 508 a.a., RecA-superfamily ATPases implicated in signal transduction from Pseudomonas stutzeri RCH2

 Score = 53.5 bits (127), Expect = 2e-11
 Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 36/207 (17%)

Query: 71  EVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSGQMP---TLYVT 127
           E PR ++G + LD +LGGG+ P    L  G+PG+GK+T+ LQ   LL G       LYVT
Sbjct: 14  EPPRISTGSEGLDDILGGGLDPNRMYLYEGSPGSGKTTIALQ--FLLEGVRQGERVLYVT 71

Query: 128 GEESLQQVAMRASRLGLPKQHLKMLS----ETNVDRICQIAEQEKPRIMVIDSIQVMHVA 183
             E+  ++ + A R G     + +      ET++D   ++       + + ++ Q +   
Sbjct: 72  LSETKDELELVAKRHGWSLDGIDVFELVTPETSLDPDLELTVLHPVEMELSETTQQVFDR 131

Query: 184 DVQSSPG-----SVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHII--- 235
             +++P      S++++R  A +  RY +Q                LA    L+H     
Sbjct: 132 VTETNPSRVIFDSLSEMRLLAQSPLRYRRQ---------------VLA----LKHFFTTR 172

Query: 236 DCSILLDGDTDSRFRTLRSHKNRFGAV 262
           +C+++L  D  S    L+ H    G V
Sbjct: 173 NCTVILLDDQTSEVGDLQLHSISHGVV 199



 Score = 39.3 bits (90), Expect = 3e-07
 Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)

Query: 76  TSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQ--TMCLLSGQMPTLYVTGEESLQ 133
           +SG   LD++LGGG+  G   L+ G  G GKS+L L         G+    +V  +E++ 
Sbjct: 260 SSGNPALDKMLGGGLERGTNALLVGAAGVGKSSLALSYAVAACKRGEQVAFFVF-DENIA 318

Query: 134 QVAMRASRLGLPKQ 147
            +  R   LGLP +
Sbjct: 319 TLLARGRALGLPME 332