Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., DNA repair protein RadA from Synechococcus elongatus PCC 7942

 Score =  384 bits (986), Expect = e-111
 Identities = 212/445 (47%), Positives = 282/445 (63%), Gaps = 20/445 (4%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVA---------RNERLV 51
           M +++  YVC  CG   PR+ G+C AC SWNS+ E  +A + + A         R +RL 
Sbjct: 1   MARSRSEYVCQNCGHRAPRYVGRCPACESWNSLVEEAIAPTAKTAIATVLPSRQRRDRLA 60

Query: 52  GYAGALEAK--VQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTL 109
                  A   +  +AD+  Q   R  SG  E DRVLGGG+VPG+ +LIGG+PG GKSTL
Sbjct: 61  EAPPQAVAAQPLSAIADVSQQ---RIASGSGEFDRVLGGGLVPGSLVLIGGDPGIGKSTL 117

Query: 110 LLQTMCLLSGQMPTLYVTGEESLQQVAMRASRLGLPK------QHLKMLSETNVDRICQI 163
           LLQT   LS Q P LYV  EES QQV +R  R+   +      Q   +L E ++D I   
Sbjct: 118 LLQTATALSQQQPILYVCAEESGQQVKLRWQRIAAHRSPNQADQQFYLLPEIDLDAIVAE 177

Query: 164 AEQEKPRIMVIDSIQVMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDG 223
            E  +P + +IDSIQ ++   + S+PGSVAQVRE   AL R AKQ  + + IVGHVTKDG
Sbjct: 178 LETLRPPVAIIDSIQALYSPALGSAPGSVAQVRECTAALMRVAKQLTITLLIVGHVTKDG 237

Query: 224 TLAGPKVLEHIIDCSILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSA 283
            +AGPKVLEH++D  +  +GD  +  R LRS KNRFGA  ELG+F M  +G+ EV NPSA
Sbjct: 238 AIAGPKVLEHLVDTVLYFEGDRFASHRLLRSVKNRFGASQELGIFEMVDRGLEEVGNPSA 297

Query: 284 IFLSRGEEATSGSSVMVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVL 343
           +FL   ++ATSG++ +V  EGTRPLLVE+QALV  S  ++PRR   G+E NRL  +LAVL
Sbjct: 298 LFLGSRDQATSGTATIVACEGTRPLLVELQALVSPSSYSSPRRAGTGIEYNRLLQILAVL 357

Query: 344 HKHGGLQMADQDVFVNVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGE 403
            K  GL ++  D +V   GG+ V E +ADL + +AL++SFRDR L  D V+ GE+GL G+
Sbjct: 358 EKRLGLPLSKFDAYVASAGGLNVAEPAADLGIAIALVASFRDRCLRPDTVLIGEIGLGGQ 417

Query: 404 IRPVPSGQERLNEAFKHGFKKAIVP 428
           +RPV   + RL EA K GF++A++P
Sbjct: 418 VRPVSQVELRLKEAAKLGFQRALLP 442