Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., DNA repair protein RadA from Sinorhizobium meliloti 1021

 Score =  372 bits (954), Expect = e-107
 Identities = 196/448 (43%), Positives = 282/448 (62%), Gaps = 24/448 (5%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAA--------SPQVARNERLVG 52
           M KA+  +VC  CG    RW G+C+ CG WN+I E    A        +P+  R   L  
Sbjct: 21  MAKARTQFVCQNCGTVHSRWVGKCDGCGEWNTIIEDNPTAGIGGGPMRTPKKGRPVALTT 80

Query: 53  YAGALEAKVQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQ 112
            +G +E            + PR  +G  ELDRV GGG V G+A+L+GG+PG GKST+L+Q
Sbjct: 81  LSGEIE------------DAPRIQTGISELDRVTGGGFVRGSALLVGGDPGIGKSTVLMQ 128

Query: 113 TMCLLSGQMP-TLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNV-DRICQIAEQEKPR 170
               L+ +    +YV+GEE++ QV +RA RLG     + + +ETNV D +  ++E ++P 
Sbjct: 129 AAAALARRKHRVIYVSGEEAIAQVRLRAQRLGAADSDVLLAAETNVEDILATLSEGKRPD 188

Query: 171 IMVIDSIQVMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKV 230
           +++IDSIQ +    V S+PG+V QVR    A+ R+AKQ   AV +VGHVTK+G +AGP+V
Sbjct: 189 LVIIDSIQTLWSDIVDSAPGTVTQVRTGVQAMIRFAKQTGTAVVLVGHVTKEGQIAGPRV 248

Query: 231 LEHIIDCSILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGE 290
           +EH++D  +  +GD    +R LR+ KNRFG  +E+GVF M+ +G+REV+NPS +FL    
Sbjct: 249 VEHMVDAVLYFEGDRGHHYRILRTVKNRFGPTDEIGVFEMSDKGLREVANPSELFLGERN 308

Query: 291 EATSGSSVMVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQ 350
             + G++V    EGTRP+LVE+QALV  + L  PRR  VG +  RLS++LAVL  H G++
Sbjct: 309 AKSPGAAVFAGMEGTRPVLVEVQALVAPTSLGTPRRAVVGWDSARLSMILAVLEAHCGIR 368

Query: 351 MADQDVFVNVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSG 410
           +   DV++NV GG +++E +ADLA+  AL+SS     LP D V FGEV L+G +RPV   
Sbjct: 369 LGQHDVYLNVAGGYRISEPAADLAVASALVSSLAGLALPPDCVYFGEVSLSGAVRPVAHT 428

Query: 411 QERLNEAFKHGFKKAIVPIAN--MPKGG 436
            +RL EA K GF +A++P A+  +PK G
Sbjct: 429 AQRLKEAEKLGFSQAVLPSASTELPKNG 456