Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 45.1 bits (105), Expect = 5e-09
 Identities = 55/198 (27%), Positives = 82/198 (41%), Gaps = 29/198 (14%)

Query: 77  SGFKELDRVLGGGIVPGAAILIGGNPGAGKSTL--LLQTMCLLSGQMPTLYVTGEESLQQ 134
           SG   LD + GGG   G   L+ G  G GKST+  L  T  L  G+   L++  EE ++ 
Sbjct: 257 SGVDTLDEMFGGGQESGTTTLVIGQAGTGKSTMASLYATAALKRGESVGLFLF-EERIET 315

Query: 135 VAMRASRLGLPKQHLK-----MLSETNVDRIC-----QIAEQ----EKPRIMVIDSIQVM 180
              R+  LG+  +        +L + N + I      QI +Q    EK +++VIDS    
Sbjct: 316 FFRRSEGLGMALRQFHEDGQLILRDFNPNEISPGEFGQIVQQSVNSEKVKVVVIDSF--- 372

Query: 181 HVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSIL 240
               + S P     VR+  + L   A+   + + IV      G   G       ID  + 
Sbjct: 373 -TGYLNSLPHREKAVRDIQSLLKYLARAGVLTILIVAQHGLLGQGVG-------IDVDVS 424

Query: 241 LDGDTDSRFRTLRSHKNR 258
             GDT    R +  H+ R
Sbjct: 425 FLGDTVLLLR-IAEHEGR 441



 Score = 36.2 bits (82), Expect = 2e-06
 Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 29/179 (16%)

Query: 76  TSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTM-CLLSGQMPTLYVTGEES--- 131
           +SG   LD +L GG+      ++ G PG+GK+T  LQ +   ++   P +YV+  ++   
Sbjct: 13  SSGISGLDEILRGGLPASNLYIVQGAPGSGKTTAALQFLRAGVALGEPCIYVSLSQTRAE 72

Query: 132 LQQVAM---------RASRLG-------LPKQHLKMLSETNVDR----ICQIAEQEKPRI 171
           L+ +A+         R   L           Q +   +E  +D     I    E+ KP  
Sbjct: 73  LEAIALSHGWTLDGIRVEELSASDSINRAADQTIFQTTELRLDETRKAIESAIEEHKPSR 132

Query: 172 MVIDSIQVMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKV 230
           +V DS+  + +    S      + R    A   +  Q N+   ++   T +    G +V
Sbjct: 133 LVYDSLLEIRLITADS-----PRFRRELIAFKAFLAQRNIVALLLDTQTSETDRTGEEV 186