Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., DNA repair protein RadA (RefSeq) from Shewanella amazonensis SB2B

 Score =  673 bits (1737), Expect = 0.0
 Identities = 336/454 (74%), Positives = 397/454 (87%), Gaps = 1/454 (0%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAK 60
           M K K AYVCNECG DFPRWQGQC+AC  WNSI+EVRL A+  VAR+ R  GYAGA  ++
Sbjct: 1   MAKNKTAYVCNECGQDFPRWQGQCSACLEWNSITEVRLGAAT-VARSGRFSGYAGAGVSE 59

Query: 61  VQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSGQ 120
           V+TL  IDL E+PR  S F E DRVLGGGIVPG+AILIGG+PGAGKSTLLLQT+C L+  
Sbjct: 60  VKTLDQIDLNELPRIPSSFTEFDRVLGGGIVPGSAILIGGHPGAGKSTLLLQTLCQLAEV 119

Query: 121 MPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQVM 180
           MP LYVTGEESLQQVAMRA RLGLP   LKMLSET+V+ +C IA +E+P+++V+DSIQVM
Sbjct: 120 MPALYVTGEESLQQVAMRAHRLGLPTSKLKMLSETSVETLCDIALKEQPKLIVVDSIQVM 179

Query: 181 HVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSIL 240
           H++DVQSSPGSVAQVRESA+ LTR+AKQN +AV +VGHVTKDG+LAGPKVLEH IDCS++
Sbjct: 180 HMSDVQSSPGSVAQVRESASFLTRFAKQNGIAVIMVGHVTKDGSLAGPKVLEHCIDCSVM 239

Query: 241 LDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSVMV 300
            +GD+DSR+RTLRSHKNRFGA+NELGVFAMT +G++EV+NPSAIFLSRGEEA+SGS VMV
Sbjct: 240 FEGDSDSRYRTLRSHKNRFGAINELGVFAMTERGLKEVANPSAIFLSRGEEASSGSLVMV 299

Query: 301 VWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVNV 360
           VWEGTRPLLVE+Q LVD S L+NPRRVAVG++ NRL++LLAV+H+HGGLQM+DQDVFVNV
Sbjct: 300 VWEGTRPLLVELQVLVDNSALSNPRRVAVGMDANRLAMLLAVMHRHGGLQMSDQDVFVNV 359

Query: 361 VGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFKH 420
           VGGVKVTETSADL LL+A++SSFR   LP+D+V FGEVGL+GEIRPVP+GQERL EA KH
Sbjct: 360 VGGVKVTETSADLTLLLAMVSSFRGEVLPRDLVAFGEVGLSGEIRPVPNGQERLVEAAKH 419

Query: 421 GFKKAIVPIANMPKGGIEGMQIHGVKKLSDAIAA 454
           GFK+AIVP ANMPK   EGM++ GV KL++A+AA
Sbjct: 420 GFKRAIVPRANMPKKPPEGMEVIGVSKLAEALAA 453