Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., DNA repair protein RadA (NCBI) from Rhodospirillum rubrum S1H

 Score =  382 bits (980), Expect = e-110
 Identities = 212/465 (45%), Positives = 296/465 (63%), Gaps = 21/465 (4%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAK 60
           M K    +VC  CGA +PRW G+C ACG WNSI+E     +P  A  +   G  G     
Sbjct: 1   MAKNAPRFVCQACGAVYPRWMGRCEACGEWNSIAE----EAPAEALPKGQTGGRGG---- 52

Query: 61  VQTLADIDLQEV----PRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMC- 115
            Q L+ + L+ V    PR  +G  ELDRV GGG+V G+A+LIGG+PG GKSTLLLQ +  
Sbjct: 53  -QRLSFVSLEGVGAPPPRLLTGIPELDRVAGGGLVAGSALLIGGDPGIGKSTLLLQAVAG 111

Query: 116 LLSGQMPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNV-DRICQIAEQEKPRIMVI 174
           L  G   ++Y++GEE++ QV +RA RLGL K  + + + T+V D +  +   E P ++VI
Sbjct: 112 LARGGARSVYISGEEAIDQVRLRALRLGLEKAPVDLAAATSVRDIVATLDSGEPPDVVVI 171

Query: 175 DSIQVMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHI 234
           DSIQ M++  + S+PG+VAQVR  +  L R AK+    +F+VGHVTK+G +AGP+V+EH+
Sbjct: 172 DSIQTMYLDTLDSAPGTVAQVRAGSHELIRLAKRRGFVLFLVGHVTKEGQMAGPRVMEHM 231

Query: 235 IDCSILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATS 294
           +D  I  +G+    FR LR+ KNRFGA +E+GVF M+  G+ EV NPSA+FL+      +
Sbjct: 232 VDAVIYFEGERGHPFRILRAVKNRFGATDEIGVFEMSDAGLSEVPNPSALFLAERRGNVT 291

Query: 295 GSSVMVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQ 354
           GS V    EGTRP+LVEIQALV  S   + RR  VG +  RL++++AVL    GL +   
Sbjct: 292 GSCVFAGMEGTRPMLVEIQALVGPSAPGSARRAVVGWDGGRLAMVMAVLETRCGLALGGN 351

Query: 355 DVFVNVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERL 414
           DV++NV GG+++ E +ADLA+  AL+SSF   P+P D+VVFGE+GL+GEIR V  G  RL
Sbjct: 352 DVYLNVAGGLRIGEPAADLAVAAALVSSFSGVPVPPDMVVFGEIGLSGEIRAVAHGDTRL 411

Query: 415 NEAFKHGFKKAIVPIANMPKG-----GI-EGMQIHGVKKLSDAIA 453
            EA K GF +A++P      G     G+ EG+++  +  L D +A
Sbjct: 412 KEAAKLGFDQALMPARPRDSGKRGGPGVKEGLRMREIGHLQDLVA 456