Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., DNA repair protein RadA from Rhodopseudomonas palustris CGA009

 Score =  393 bits (1009), Expect = e-114
 Identities = 210/456 (46%), Positives = 293/456 (64%), Gaps = 8/456 (1%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAK 60
           M KA  ++VC  CGA F RWQG+C ACG WN++ E     +  V+   +  G    LE+ 
Sbjct: 1   MAKASSSFVCQNCGAAFNRWQGKCEACGEWNTLVEEAGDNAVPVSIRAKRRGRTFKLESL 60

Query: 61  VQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLS-G 119
                D      PR  SG  ELDRV GGG V G+ +L+GG+PG GKSTLL Q   L++  
Sbjct: 61  AGKSND-----APRLPSGMAELDRVTGGGFVRGSVLLVGGDPGIGKSTLLTQATSLMAKA 115

Query: 120 QMPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNV-DRICQIAEQEKPRIMVIDSIQ 178
              T+Y++GEE++ QV +RA RLGL    +++ +ET+V D +  ++E   P+++VIDSIQ
Sbjct: 116 GHRTVYISGEEAIAQVRLRAERLGLASAPVELAAETSVEDIVATLSEGATPKLIVIDSIQ 175

Query: 179 VMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCS 238
            M    V+S+PG+V QVR SA AL R+AK+   A+ +VGHVTKDG +AGP+V+EH++D  
Sbjct: 176 TMWTDTVESAPGTVTQVRASAQALIRFAKKTGAAIILVGHVTKDGQIAGPRVVEHMVDAV 235

Query: 239 ILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSV 298
           +  +G+   +FR LRS KNRFG  +E+GVF MTG G+REVSNPS +FLS  +  + G++V
Sbjct: 236 LSFEGEGSQQFRILRSVKNRFGPTDEIGVFEMTGLGLREVSNPSELFLSERDLGSPGTAV 295

Query: 299 MVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFV 358
               EGTRP+LVE+QALV  S L  PRR  VG +  RLS++LAVL  H G++++  DV+ 
Sbjct: 296 FAGIEGTRPVLVELQALVAPSTLGTPRRAVVGWDSARLSMVLAVLEAHCGVKLSGYDVYF 355

Query: 359 NVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAF 418
           NV GG+++ E +ADLA   AL+SS  + PLP D V FGE+ L+G +RPV     RL EA 
Sbjct: 356 NVAGGLRINEPAADLAAAAALVSSLANAPLPTDAVYFGEISLSGAVRPVAQTPARLKEAA 415

Query: 419 KHGFKKAIVPIANMPKGGIE-GMQIHGVKKLSDAIA 453
           K GF +A++P     +   + G+ +  V  LS  +A
Sbjct: 416 KLGFARAVLPEQTRGEAPADAGLALQSVGGLSSLVA 451