Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., DNA repair protein RadA from Phaeobacter inhibens DSM 17395

 Score =  390 bits (1002), Expect = e-113
 Identities = 208/428 (48%), Positives = 280/428 (65%), Gaps = 8/428 (1%)

Query: 4   AKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAKVQT 63
           AK  Y C+ CGA F +W G+C+ CG WNSI+E +  +    A         G    K   
Sbjct: 2   AKTTYSCSACGASFSKWSGRCDGCGEWNSITEDKGLSKGGPASKS-----LGMRRGKTIP 56

Query: 64  LADIDLQEVP--RFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSGQ- 120
           L+D+  +E P  R   G  ELDRVLGGG+VP +AIL+GG+PG GKSTLLLQ     +   
Sbjct: 57  LSDLATEEAPPPRTCCGVGELDRVLGGGLVPASAILVGGDPGIGKSTLLLQAAAQFAQSG 116

Query: 121 MPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQVM 180
           + T+YV+GEE+  QV MRA RLGL +  +K+ +ETN+  I    E E+P++ +IDSIQ M
Sbjct: 117 LKTIYVSGEEASAQVRMRAQRLGLAEAPVKLAAETNLRDILTTLEAERPQLAIIDSIQTM 176

Query: 181 HVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSIL 240
               V S+PGSV+QVR +A  LT +AK N V++ +VGHVTK+G +AGP+V+EH++D  + 
Sbjct: 177 WADHVDSAPGSVSQVRAAAHELTTFAKTNGVSIIMVGHVTKEGQIAGPRVVEHMVDTVLY 236

Query: 241 LDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSVMV 300
            +G+   +FR LR+ KNRFG  +E+GVF MTG G+ EV NPSA+FLS     + GS V  
Sbjct: 237 FEGERGHQFRILRAVKNRFGPADEIGVFEMTGGGLSEVRNPSALFLSERGTPSPGSVVFS 296

Query: 301 VWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVNV 360
             EGTRP+LVE+QALV  S  + PRR  VG + +RL+++LAVL    G+  A  DV++NV
Sbjct: 297 GIEGTRPVLVEMQALVAPSPHSQPRRAVVGWDSSRLAMILAVLEARCGIPFAGLDVYLNV 356

Query: 361 VGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFKH 420
            GG+K++E +ADLA+  ALLS+  D  LP D VVFGE+ L+G +RP P  + RL EA K 
Sbjct: 357 AGGMKISEPAADLAVAAALLSAREDTALPADTVVFGEISLSGALRPAPQTENRLKEAQKL 416

Query: 421 GFKKAIVP 428
           GF  AI P
Sbjct: 417 GFTAAIAP 424