Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., DNA repair protein RadA (DNA repair protein SMS) from Mycobacterium tuberculosis H37Rv

 Score =  317 bits (812), Expect = 5e-91
 Identities = 170/437 (38%), Positives = 263/437 (60%), Gaps = 10/437 (2%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAK 60
           +  A+  Y C+EC     +W G+C  CG W ++ EV + ++    R   +   +GA+   
Sbjct: 1   VANARSQYRCSECRHVSAKWVGRCLECGRWGTVDEVAVLSAVGGTRRRSVAPASGAVP-- 58

Query: 61  VQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTM--CLLS 118
              ++ +D        +G  ELDRVLGGGIVPG+  L+ G+PG GKSTLLL+       S
Sbjct: 59  ---ISAVDAHRTRPCPTGIDELDRVLGGGIVPGSVTLLAGDPGVGKSTLLLEVAHRWAQS 115

Query: 119 GQMPTLYVTGEESLQQVAMRASRLGLPKQ--HLKMLSETNVDRICQIAEQEKPRIMVIDS 176
           G+   LYV+GEES  Q+ +RA R+G   +   + + ++++V  +    E  +P ++++DS
Sbjct: 116 GRR-ALYVSGEESAGQIRLRADRIGCGTEVEEIYLAAQSDVHTVLDQIETVQPALVIVDS 174

Query: 177 IQVMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIID 236
           +Q M  ++     G V QVR    ALT  AK N VA+ +VGHVTKDG +AGP+ LEH++D
Sbjct: 175 VQTMSTSEADGVTGGVTQVRAVTAALTAAAKANEVALILVGHVTKDGAIAGPRSLEHLVD 234

Query: 237 CSILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGS 296
             +  +GD +   R +R  KNRFGA +E+G F +   G+  + +PS +FL +     +G+
Sbjct: 235 VVLHFEGDRNGALRMVRGVKNRFGAADEVGCFLLHDNGIDGIVDPSNLFLDQRPTPVAGT 294

Query: 297 SVMVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDV 356
           ++ V  +G RPL+ E+QAL+      +PRR   G+ Q R +++ AVL KH  L +A  D+
Sbjct: 295 AITVTLDGKRPLVGEVQALLATPCGGSPRRAVSGIHQARAAMIAAVLEKHARLAIAVNDI 354

Query: 357 FVNVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNE 416
           +++ VGG+++TE SADLA+ +AL S++ + PLP   V+ GEVGLAG+IR V     RL+E
Sbjct: 355 YLSTVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSE 414

Query: 417 AFKHGFKKAIVPIANMP 433
           A + GF  A+VP ++ P
Sbjct: 415 AARQGFTIALVPPSDDP 431