Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., DNA repair protein RadA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  334 bits (856), Expect = 4e-96
 Identities = 184/437 (42%), Positives = 262/437 (59%), Gaps = 6/437 (1%)

Query: 2   VKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGA-LEAK 60
           +K +  YVC  CGA  P+W+GQC AC  WN++    L  +P+  +     G +    +++
Sbjct: 1   MKLRETYVCTACGARAPQWRGQCPACKEWNTLE---LTVAPREGKAGARPGASSVGAQSR 57

Query: 61  VQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTM-CLLSG 119
            Q L D+       F SG   LDRVLG G+VPGAAIL+GG PG GKSTLLLQ    + + 
Sbjct: 58  AQPLKDVADHGAEPFGSGLDALDRVLGKGLVPGAAILVGGEPGIGKSTLLLQVAGAVAAA 117

Query: 120 QMPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAE-QEKPRIMVIDSIQ 178
               LY++GEESL Q+  RA+RLG+    L  ++ T +D +    E  E P ++++DS+Q
Sbjct: 118 GRGVLYLSGEESLPQLKARAARLGVLHDELMAVATTRLDDVLPHLEGPEAPALLIVDSVQ 177

Query: 179 VMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCS 238
            +     +  PG+V+QVR  +T +    K++   V +VGHVTKDG LAGP++LEH++D  
Sbjct: 178 TVSSDRAEGLPGNVSQVRAVSTEIVEACKRSGTTVLLVGHVTKDGALAGPRLLEHLVDTV 237

Query: 239 ILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSV 298
           I ++GD    FR LR  KNRFG   EL VF M  QGM  V +PS  FL   + A SG+++
Sbjct: 238 ISIEGDRRQMFRLLRVLKNRFGPNQELLVFRMVEQGMEVVEDPSTFFLGARDPALSGTAL 297

Query: 299 MVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFV 358
           ++  +G RPL VE+QALV  S LA PRR  +G + NRL LLLAVL K   L     D++ 
Sbjct: 298 VMAVDGQRPLAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIYA 357

Query: 359 NVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAF 418
            + GG+K+ +   DL L+ A+LSSF D PLP+  V +GEV L G++RPV +   R ++A 
Sbjct: 358 KIGGGMKLQDPGMDLGLVAAVLSSFYDLPLPERAVFWGEVDLNGQVRPVAAHTIRRDQAR 417

Query: 419 KHGFKKAIVPIANMPKG 435
           + G+   + P  +  +G
Sbjct: 418 RLGYTPILHPADDAARG 434