Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., DNA repair protein RadA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  327 bits (838), Expect = 5e-94
 Identities = 182/431 (42%), Positives = 262/431 (60%), Gaps = 8/431 (1%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEA- 59
           M K +  YVC+ CGA+ P+W+GQC  C +WN++  V +A   +       V   GA ++ 
Sbjct: 1   MAKVRETYVCSACGANTPQWRGQCPTCKAWNTLDAVTVARETRSG-----VRRQGAPDSV 55

Query: 60  KVQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTM-CLLS 118
           + + L D+  +    F +G + LDRVLG G+VPGAAIL GG PG GKSTLLLQ    + +
Sbjct: 56  RPRPLRDVSDEGGSPFGTGLEALDRVLGSGLVPGAAILFGGEPGIGKSTLLLQVAGAVAA 115

Query: 119 GQMPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQ-EKPRIMVIDSI 177
                LY++GEESL Q+  RA RLG+  + L  ++ + V+ +  + E    P ++V+DS+
Sbjct: 116 SGRDVLYLSGEESLTQLKGRAERLGVLHERLLAVATSRVEDVFSVLESGTPPALLVLDSV 175

Query: 178 QVMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDC 237
           Q +     +  PG+V+QVR  AT +    K+   AV +VGHVTKDG LAGP++LEH++D 
Sbjct: 176 QTLTSDLAEGLPGNVSQVRAVATEVVDRCKRAGTAVLLVGHVTKDGNLAGPRLLEHMVDT 235

Query: 238 SILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSS 297
            + L+GD    FR LR  KNRFG   EL VF M  +G+  V +PS  FL   + A SG++
Sbjct: 236 VVSLEGDRRQMFRLLRVLKNRFGPNQELLVFQMAQRGLEVVEDPSTFFLGARDPALSGTA 295

Query: 298 VMVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVF 357
           V++  +G RP  VE+QALV  S LA PRR  +G + NRL LLLAVL K   L     D++
Sbjct: 296 VVMAVDGQRPFAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIY 355

Query: 358 VNVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEA 417
             + GG+++ +   DLAL+ A+LSSF D  LP+  V++GEV L G++RPV +   RL +A
Sbjct: 356 AKIGGGMRLQDPGMDLALVAAVLSSFYDVALPERAVLWGEVDLNGQVRPVAAHDIRLGQA 415

Query: 418 FKHGFKKAIVP 428
            + G+   + P
Sbjct: 416 ARLGYGPVLHP 426