Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., DNA repair protein RadA (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  379 bits (972), Expect = e-109
 Identities = 208/456 (45%), Positives = 286/456 (62%), Gaps = 12/456 (2%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISE-VRLAASPQVARNERLVGYAGALEA 59
           M K    ++C ECGA   +W G+C+ CG+WNSISE V L+A P            G +  
Sbjct: 1   MAKPATRFICAECGAAHSKWSGRCDGCGAWNSISEEVPLSAGPSKKS-------LGGIRG 53

Query: 60  KVQTLADIDLQEVP--RFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLL 117
           K   L D+  ++ P  R TS  +ELDRVLGGG+V  +A+L+GG+PG GKSTLLLQ     
Sbjct: 54  KKVPLGDLASEDAPPPRRTSQLEELDRVLGGGLVDASAVLVGGDPGIGKSTLLLQAAASF 113

Query: 118 S-GQMPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDS 176
           +      +Y++GEE+  QV MRA RLGL    +K+ +ETN+  I    E E P + ++DS
Sbjct: 114 ARAGAKAVYISGEEATSQVRMRARRLGLADAAVKLGAETNLRDILTTLEAEAPDLAILDS 173

Query: 177 IQVMHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIID 236
           IQ +    V S+PGSVAQVR  A  L  +AK++  +V +VGHVTK+G +AGP+V+EH++D
Sbjct: 174 IQTLWSDTVDSAPGSVAQVRACAHELVTFAKRSGTSVILVGHVTKEGQIAGPRVVEHMVD 233

Query: 237 CSILLDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGS 296
             +  +G+   +FR LRS KNRFG  +E+GVF MTG G+ EV+NPSA+FLS  +    GS
Sbjct: 234 TVLYFEGERGHQFRILRSVKNRFGPADEIGVFEMTGAGLAEVANPSALFLSGRDAPAPGS 293

Query: 297 SVMVVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDV 356
            V    EGTRP+L E+QALV  S LAN RR  VG +  RLS++LAVL    G+     DV
Sbjct: 294 VVFAGIEGTRPVLCELQALVAPSALANARRTVVGWDSGRLSMILAVLEARCGIPFTGLDV 353

Query: 357 FVNVVGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNE 416
           ++NV GG+++ E +ADLA+  ALLS+  D  LP ++VVFGE+ L+G +RPV   + RL E
Sbjct: 354 YLNVAGGLRIGEPAADLAVATALLSAREDIALPAEMVVFGEISLSGALRPVGQTENRLKE 413

Query: 417 AFKHGFKKAIVPIANMPKGGIEGMQIHGVKKLSDAI 452
           A K GF KA+ P A    G   G++   +  L+  +
Sbjct: 414 AAKLGFTKALAP-AGSKTGTTSGLETRQMPDLATVV 448