Pairwise Alignments

Query, 458 a.a., DNA repair protein RadA from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., DNA repair protein RadA from Phocaeicola vulgatus CL09T03C04

 Score =  372 bits (954), Expect = e-107
 Identities = 193/461 (41%), Positives = 295/461 (63%), Gaps = 16/461 (3%)

Query: 1   MVKAKRAYVCNECGADFPRWQGQCNACGSWNSISEVRLAASPQVARNERLVGYAGALEAK 60
           M K K  YVC  CG D P+W G+C +CG+WN+  E  +   P    N+R V    ++++K
Sbjct: 1   MAKEKTVYVCTNCGQDSPKWVGKCPSCGAWNTYVEEIIRKEPA---NKRPVSGLESVKSK 57

Query: 61  VQTLADIDLQEVPRFTSGFKELDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCLLSGQ 120
             TL DI   + PR     +EL+RVLGGG+VPG+ +L+GG PG GKSTL+LQT+  L  +
Sbjct: 58  PVTLNDITGGDEPRIDMHDEELNRVLGGGLVPGSLVLLGGEPGIGKSTLVLQTVLHLPDK 117

Query: 121 MPTLYVTGEESLQQVAMRASRLGLPKQHLKMLSETNVDRICQIAEQEKPRIMVIDSIQVM 180
              LY++GEES +Q+ +RA R+        ++ ET++++I    +  +P +++IDSIQ +
Sbjct: 118 K-VLYISGEESARQLKLRADRIPHNSSDCLIVCETSLEQIYVHIKNTQPDLVIIDSIQTI 176

Query: 181 HVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSIL 240
               + SSPGS+ QVRE + ++ ++AK+ N  V ++GH+ K+G++AGPKVLEHI+D  + 
Sbjct: 177 STETIDSSPGSLVQVRECSASILKFAKETNTPVILIGHINKEGSIAGPKVLEHIVDTVLQ 236

Query: 241 LDGDTDSRFRTLRSHKNRFGAVNELGVFAMTGQGMREVSNPSAIFLSRGEEATSGSSVMV 300
            +GD    +R LRS KNRFG+  ELG++ M   G+R+VSNPS + LS+  +  SG ++  
Sbjct: 237 FEGDQHYMYRILRSIKNRFGSTAELGIYEMRQNGLRQVSNPSELLLSQDHDGMSGVAIAS 296

Query: 301 VWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVNV 360
             EG RP L+E QALV  +   NP+R A G +  R+++LLAVL K  G ++A +DVF+N+
Sbjct: 297 AIEGVRPFLIETQALVSSAVYGNPQRSATGFDLRRMNMLLAVLEKRVGFKLAQKDVFLNI 356

Query: 361 VGGVKVTETSADLALLMALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLNEAFKH 420
            GG+KV + + DL+++ A+LSS  D  + +D  + GEVGL+GEIRPV   ++R+ EA K 
Sbjct: 357 AGGLKVNDPAIDLSVISAILSSNMDTEIERDTCMAGEVGLSGEIRPVNRIEQRIGEAEKL 416

Query: 421 GFKKAIVPIANMPKGGIEGM-------QIHGVKKLSDAIAA 454
           GFK+ ++     PK  ++GM       +I  V+K+ +A  A
Sbjct: 417 GFKQILI-----PKHNLQGMDTSKLKIEIIPVRKVEEAFRA 452