Pairwise Alignments

Query, 695 a.a., elongation factor G from Vibrio cholerae E7946 ATCC 55056

Subject, 682 a.a., elongation factor G (RefSeq) from Shewanella loihica PV-4

 Score =  363 bits (933), Expect = e-104
 Identities = 226/688 (32%), Positives = 357/688 (51%), Gaps = 23/688 (3%)

Query: 8   RNIGIFAHVDAGKTTTTERILKLTGKIHRLGEVHDGASTMDFMEQEAERGITIQSAATTC 67
           RN+ +  H  AGK+T  E +L     I + G V  G +  DF  QE +   +++ +    
Sbjct: 10  RNLAVLGHTGAGKSTLLEALLFQGEAIAQKGRVDKGTNHADFTAQEKDHRHSLEPSFLNL 69

Query: 68  FWKGHRFNVIDTPGHVDFTVEVYRSLKVLDGGIGVFCGSGGVEPQSETNWRYANESEVSR 127
            +  H  N IDTPG  DF       L  ++  + V   + G+E  ++  +  A       
Sbjct: 70  DFDNHHINFIDTPGLPDFFGRALLPLSGVESVLLVINAATGIETITQRAFEAARAQGKVV 129

Query: 128 LIFVNKLDRMGADFFRVVEQVKKVLGANPLVMTLPIGREDEFVGVVDVLTRQAYVWDDSG 187
           LI +N +D  GA+   ++++++   G   L + LP    D+ +              D  
Sbjct: 130 LIAINHIDGNGANLAGLLDEIQTKFGHRCLPVNLPNAALDDVI--------------DCY 175

Query: 188 LPENFEVKEVPADMVDQVEEYREMMIETAVEQDDELMMAYME-GEEPTVEQIKACIRKGT 246
           L    E++     +   V   R+ +++T +E+DDELM  Y+E GE  T EQ+ A +    
Sbjct: 176 LHPQPELQGEA--LFHDVASARDELVDTVLEEDDELMALYLEQGENLTPEQLHAPLETAL 233

Query: 247 RDLAFFPTFCGSAFKNKGMQLVLDAVVDYLPSPTEVEPQPLTDPATGEPTGEV-ATVSVD 305
           R     P    SA +  G+  +L+ ++   P+P E  P P      GE    V  T S +
Sbjct: 234 RMGHLVPVCFTSAEQQVGIGALLELIIKLSPNPLEANP-PQFIKGQGESALPVDVTQSSE 292

Query: 306 APLKALAFKI-MDDRFGALTFVRIYSGKIKKGDTILNSATGKTERIGRMVEMHANDRNEV 364
               A  F++ +D  FG +   R+Y G I  G  +      K  ++G + ++  + +  V
Sbjct: 293 DHALAYVFRVAIDPFFGRMGVFRVYQGTISLGMKLFIGDGRKPIKVGNLFKLQGDKQVSV 352

Query: 365 ESAQAGDIIAIVGMKNVQTGHTLCDP--KHECTLEPMIFPTPVISIAVKPKDKNGSEKMG 422
            SA  GDI AI  +  +  G  L D   + E  L  ++ P P+  +AV  K +   +K+ 
Sbjct: 353 TSAVPGDICAISKVDELTVGAVLHDSHDEDEFHLPELVLPQPIFGLAVSAKRRGDEQKIA 412

Query: 423 IAIGKMVAEDPSFQVETDEDSGETILKGMGELHLDIKVDILKRTYGVELEVGAPQVAYRE 482
             + K+V EDPS  +  +E  G+TIL+G G+LHL I ++     + V++E   P VAYRE
Sbjct: 413 EVLNKLVVEDPSLHIAKNEAEGQTILQGQGDLHLQIALEKAHDLFNVDMETDVPAVAYRE 472

Query: 483 TITKAVEDSYTHKKQSGGSGQFGKIDYRIRPGEQNSGFTFKSTVVGGNVPKEFWPAVEKG 542
           TIT++    Y HKKQSGG+GQFG+++  + P  + +GF F S VVGG+VP ++ PAVEKG
Sbjct: 473 TITRSATARYRHKKQSGGAGQFGEVELTVEPLPRGAGFEFVSKVVGGSVPSQYIPAVEKG 532

Query: 543 FKSMMDTGTLAGFPVLDVEVELFDGGFHAVDSSAIAFEIAAKGAFRQSIPKAAPQLLEPI 602
            K  M+ G +AGFP+ DV V L DG  H+VDS  IAF +A K AF  ++ +A P +LEPI
Sbjct: 533 VKEAMNGGAVAGFPMQDVRVSLLDGKHHSVDSKEIAFVMAGKKAFLDAVQEANPVILEPI 592

Query: 603 MKVDVFTPEDHVGDVIGDLNRRRGMI-KDQEMGLTGVRVKADVPLSEMFGYIGSLRTMTS 661
           +++ V   ++HVGD+ GD++  RG+I   Q  G   V V+ + PL+ +  Y   L+++T 
Sbjct: 593 VEMQVQVAQEHVGDITGDISANRGIICGTQAQGNGKVEVEVEAPLATVDDYSTRLKSLTG 652

Query: 662 GRGQFSMEFSHYAPCPNNVAEQVIAEVK 689
           G GQF+M FS Y   P++V + +++  K
Sbjct: 653 GDGQFAMTFSRYDVVPDHVQKALVSAAK 680