Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., Long-chain acyl-CoA synthetases (AMP-forming) from Pseudomonas stutzeri RCH2

 Score =  130 bits (326), Expect = 2e-34
 Identities = 133/516 (25%), Positives = 212/516 (41%), Gaps = 84/516 (16%)

Query: 46  EFTYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTA 105
           + +YAE+  +       L  LG     +VAL   N  EW + DLA++    + VP+    
Sbjct: 26  QLSYAELRHEVATRACQLEQLGVQ---RVALALDNGLEWALWDLALLRAKLVCVPLPAFF 82

Query: 106 GSETIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLISISLPYPSAAKCQY---EFQT 162
            +   ++ L+H+    LI G                       P   + +C +   E   
Sbjct: 83  SAAQQEHVLQHAGIDCLIGG-----------------------PSALSERCGFQPGEAGL 119

Query: 163 LIKQHQPSEERPTHFDEKLMSIVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIEENDR 222
           L++Q     E  T      + I YTSGT+GQPKG  L   A    A+ L       +  +
Sbjct: 120 LLRQL----ETVTPVPPGTLKITYTSGTTGQPKGVCLDAEAQLAVAESLRQASLACDVQQ 175

Query: 223 LFSYLPLAHITERVYIFGSSIIGGV---LTAFPE---------SLDTFIEDVKMHRPTLF 270
               LPLA + E +    + ++ G    L    E          L  F+  +  +RP   
Sbjct: 176 HLCVLPLATLLENIAGLYAPLLAGARIDLRPLAEIGFSGAAGFELPCFVTTLNENRPHSL 235

Query: 271 ISVPRLWTLFQQRIQDKLPQKKLNILLKIPFVNSLIKRKLADGLGLDQARVLGCGSAPVS 330
           I +P+L        +             +P   SL              R +  G   V+
Sbjct: 236 ILLPQLLLALVSAAEQG-----------VPLPTSL--------------RFIAVGGGRVA 270

Query: 331 PALLEWYRSVGLNITEAWGMTESFAYSTLNYPFRADKIGTVGNAGPGIELKIAEDEEILV 390
           P LLE    +GL + E +G++E  +   LN P  A  IGTVG     + L++A+D E+LV
Sbjct: 271 PQLLERAERLGLPVFEGYGLSECASVVCLNTP-EARCIGTVGRPLAHVGLRLADDGEVLV 329

Query: 391 RSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKFVAP 450
           +   +  GY        E      WL TGD+G  + +G+L + GRKK  F TA G+ V P
Sbjct: 330 KGPRML-GYLGEPPQAGE------WLATGDLGHFE-DGFLILHGRKKHQFVTAYGRNVNP 381

Query: 451 VPIEKKLFEYSRVEMMCLIGSGLPAPILLAVPHNFPHFDRARYERTTQKVIARINSELES 510
             +E +L + + +    L G  LP  + + VP + P    A      Q  I R+N+ L  
Sbjct: 382 EWVEAELVQQAPIAQAWLHGEALPQNVAVLVPRH-PELSDA----DLQAAIDRVNAGLPD 436

Query: 511 HEQIKGVLMIKDPWSIDNGILTPTLKIKRHVLEKKY 546
           + ++   L    P++  NG+ T   +++R+ L  +Y
Sbjct: 437 YARVHHWLRADAPFTAGNGLATANGRLRRNALINRY 472