Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Pseudomonas stutzeri RCH2

 Score =  111 bits (278), Expect = 6e-29
 Identities = 117/476 (24%), Positives = 201/476 (42%), Gaps = 33/476 (6%)

Query: 4   IQPNQFNHPPCALPPPNEMLLRWAKERPNEVYLKQIINRQFVEFTYAEVADKALRLVSAL 63
           ++P    HP        + L R A   P ++ L+    R    +++  +   A R+ + L
Sbjct: 1   MRPTVEVHPSIHRNTIGDALQRIAMRSPEQIALQYRERR----WSFQALDRAANRVANHL 56

Query: 64  RALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAGSETIDYCLEHSESKILI 123
            ALG    D+VA   KN   + I  LA      I VP+  +     + Y L+ S ++ L 
Sbjct: 57  LALGLSKADRVAAYGKNSDAYLILWLACTRAGLIHVPVNYSLTEHELAYVLDQSGARALF 116

Query: 124 VGKLDDNKATA-HVLAERPNLISISLPYPSAAKCQYEFQTLIKQHQ---PSEERPTHFDE 179
           V   D  K     + A+R   I  SL        + +   +        P E      D 
Sbjct: 117 VD--DSLKGLVDRIPAQRQLAIRGSLHSNETTSDRSDILRIATGSACDLPPEVDIAETD- 173

Query: 180 KLMSIVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIEENDRLFSYLPLAHITERVYIF 239
            ++ I+YTSGT+  PKGAM ++ +        + H+ I+ +DR  + LPL H  +     
Sbjct: 174 -VVQILYTSGTTSDPKGAMHSHRSLMTEYSSCLLHLDIKASDRCLAALPLYHSAQMHVFT 232

Query: 240 GSSIIGGVLTAFPE--SLDTFIEDVKMHRPTLFISVPRLWTLFQQRIQDKLPQKKLNILL 297
             +++ G  +   +  + +  +  +K  +   F + P +W    +   ++  + +L  + 
Sbjct: 233 MPALLAGAFSCLTDTPTPEEILRLLKTEQLNSFFAPPTVWIALLR--HEQFVEAQLRHVQ 290

Query: 298 KIPFVNSLIKRKLADGLG--LDQARVLGC-GSAPVSPALLEWYRSVGLNITEAWGMTESF 354
           K+ +  S++   +A  LG  L Q+ +  C G + ++P       +  L   E      S 
Sbjct: 291 KLYYGASIMPEPIARELGARLPQSGLYNCYGQSEIAPL------ATVLTPEEHRERPTSC 344

Query: 355 AYSTLNYPFRADKIGTVGNAGPGIELKIAEDEEILVRSKGLFAGYYKNDTATAESFNDDG 414
                N   R     T     PG+        E++ RS  L  GY++    TAE+F  DG
Sbjct: 345 GRPVSNVLTRIIDPSTGEECAPGVA------GELVHRSPQLMVGYWEKPAETAEAF-ADG 397

Query: 415 WLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKFVAPVPIEKKLFEYSRVEMMCLIG 470
           W H+GD+G  D++GY+ I  R KD   T  G  VA   +E+ L+ +  V  + +IG
Sbjct: 398 WFHSGDLGYRDAQGYIWIVDRIKDIVNTG-GVLVASRDVEEALYRHPHVAEVAVIG 452