Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Pseudomonas stutzeri RCH2

 Score =  115 bits (287), Expect = 6e-30
 Identities = 140/584 (23%), Positives = 244/584 (41%), Gaps = 91/584 (15%)

Query: 4   IQPNQFNHPPCALPPPNEMLLRWAKERPNEVYLKQIINRQFVEFTYAEVADKALRLVSAL 63
           +QP    + P  +   + ++   A+   +   + ++++     + YA +A ++ +  S L
Sbjct: 1   MQPGLMQNAPLLI---SSIVTHAARAHGDREIVSRLVDEPLWRYDYACLAARSAQAASML 57

Query: 64  RALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAGSETIDYCLEHSESKILI 123
             LG  PGD V+ ++ N    +    A+     +     P    E I Y + H+ S++L+
Sbjct: 58  GKLGIGPGDCVSSLAWNTHRHYELFFAVPGIGAVLHTANPRLSDEQIVYTINHAGSQVLL 117

Query: 124 VGKLDDNKATAHVLAERPNL------ISISLPYPSAAKCQYEFQTLIKQHQPSEERPTHF 177
                D+   A V   RP L      I ++    S  +    ++ LI   QP +     F
Sbjct: 118 F----DSSFAACVARLRPRLGNIRHFIELAAQPSSGLQDVLGYEQLIAAEQPLDW--PQF 171

Query: 178 DEKLMSIV-YTSGTSGQPKGAMLTYGAFTWSAQQ--LINHIGIEENDRLFSYLPLAHITE 234
           DE   +++ YTSGT+G PKG + ++ +    A    L    G+   D +     L H T 
Sbjct: 172 DENAGAVLCYTSGTTGDPKGVLYSHRSVVLHAMAAGLSGAFGLSAFDCIMPCSSLYHGTA 231

Query: 235 RVYIFGSSIIGGVLTAFPESLD--TFIEDVKMHRPTLFISVPRLWTLFQQRIQDKLPQKK 292
               F ++I G       + +D  +  E +K    TL   VP +WT++   ++       
Sbjct: 232 WGIPFAAAINGCKFVLPCDKMDGASLQELIKTEGVTLSGGVPTIWTMYLAHLE------- 284

Query: 293 LNILLKIPFVNSLIKRKLADGLGLDQARVLGCGSAPVSPALLEWYRS-VGLNITEAWGMT 351
                          R   D   L  AR++  GSA V  A+ E +++  G+ + + WGMT
Sbjct: 285 ---------------RSGEDSGSL--ARLVIGGSA-VPRAMAETFQTKYGVAVCQLWGMT 326

Query: 352 ESFAYSTLNYP----------FRADKIGT-VGNAGPGIELKIAEDE------------EI 388
           E+     +  P             D I T  G    GIELKI ++E             +
Sbjct: 327 ETSPLGVVATPTPKLAERGQQATNDTIWTRQGRLQFGIELKIVDEEGRELPCDGVSSGSL 386

Query: 389 LVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKFV 448
            VR       YY+++ +   + ++DGW  TGDI +LD++G++ I  R KD  K+  G++V
Sbjct: 387 KVRGPWTVERYYRSEKS---ALDEDGWFDTGDIATLDADGFMRITDRSKDVIKSG-GEWV 442

Query: 449 APVPIEKKLFEYSRVEMMCLIGSGLP----APILLAVPHNFPHFDRARYERTTQKVIARI 504
           + + IE        V++  ++G   P     P+L+  PH       A  E T + ++A +
Sbjct: 443 SSIDIENVAAACPGVKVAAVVGVFHPKWEERPVLVIEPH-------ADAEVTVETILAHL 495

Query: 505 NSELESHEQIKGVLMIKDPWSIDNGILTPTLKIKRHVLEKKYHD 548
              +        V+    P       LT T KI + VL ++Y +
Sbjct: 496 EPNIVKWWMPDAVIFDAVP-------LTATGKIDKKVLRERYRN 532