Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II from Pseudomonas stutzeri RCH2

 Score =  108 bits (270), Expect = 6e-28
 Identities = 119/478 (24%), Positives = 197/478 (41%), Gaps = 78/478 (16%)

Query: 39  IINRQFVEFTYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGDYIS 98
           ++  Q + +T+AE+A+   R    L ALG   G++V + S N A+W I   A      + 
Sbjct: 38  VVRHQQLRYTWAELAEAVDRCARGLLALGLQAGERVGIWSPNNAQWCITQFATAKIGVVL 97

Query: 99  VPIFPTAGSETIDYCLEHSESKILIVG---KLDDNKAT-----------------AHVLA 138
           V I P      ++Y L+ S  + LI     K  D  A                  +H+L 
Sbjct: 98  VNINPAYRLSELEYALKQSGCRWLICADAFKTSDYHAMLHELLPELESAAVGALQSHMLP 157

Query: 139 ERPNLISISLPYPSAAKCQYE-FQTLIKQHQPSEERPT----HFDEKLMSIVYTSGTSGQ 193
           E   +IS+    P     Q++    + +Q  P + R       FD+ + +I YTSGT+G 
Sbjct: 158 ELRGVISLC-DKPVDGMLQWQALMEMAEQVGPEQLRQCGERLQFDDPI-NIQYTSGTTGF 215

Query: 194 PKGAMLTYGAFTWSAQQLINHIGIEENDRLFSYLPLAHITERVYIFGSSIIGGVLTAFPE 253
           PKGA L++     +   +   + + E+DRL   +PL H    V      +  G    +P 
Sbjct: 216 PKGATLSHYNILNNGYMVGESLRLTEHDRLVIPVPLYHCFGMVMGNLGCVTHGTTMIYPS 275

Query: 254 SLD---TFIEDVKMHRPTLFISVPRLWTLF---QQRIQDKLPQKKLNILLKIPFVNSLIK 307
           +       ++     + T    VP ++       +R    L   +  I+        ++K
Sbjct: 276 AAFEPLAALQAAAEEKATGMYGVPTMFIAMLDHPERQSLDLSSLRTGIMAGSTCPIEVMK 335

Query: 308 RKLADGLGLDQARVLGCGSAPVSPALLEWYRSVGLNITEAWGMTESFAYSTLNYPFRAD- 366
           R + D + L + ++                         A+GMTE+   ST      AD 
Sbjct: 336 RVI-DDMHLAEMQI-------------------------AYGMTETSPVSTQT---SADD 366

Query: 367 ----KIGTVGNAGPGIELKIAEDE----------EILVRSKGLFAGYYKNDTATAESFND 412
               ++ +VG   P +E KI ++           E+  R   +  GY+ N  AT ++ + 
Sbjct: 367 DLERRVTSVGRTQPHLESKIVDEHGAVVPRGQIGELCTRGYSVMLGYWNNPDATRDAIDG 426

Query: 413 DGWLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKFVAPVPIEKKLFEYSRVEMMCLIG 470
             W+HTGD+  +D EGY+ I GR KD      G+ V P  IE+ LF +  V  + +IG
Sbjct: 427 ARWMHTGDLAVMDDEGYIKIVGRNKDMI-IRGGENVYPREIEEFLFTHPAVADVQVIG 483