Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 649 a.a., long-chain-fatty-acid CoA ligase from Synechococcus elongatus PCC 7942

 Score =  142 bits (357), Expect = 5e-38
 Identities = 155/639 (24%), Positives = 260/639 (40%), Gaps = 115/639 (17%)

Query: 13  PCALPPPNEMLLRWAKERPNEVYLKQIINRQFVEF-----------------TYAEVADK 55
           P A+ P  + LL   K   +   L QI  R   +F                 +Y E+A +
Sbjct: 9   PRAITPHEQQLLAKLKSYRDIQSLSQIWGRAASQFGSMPALVAPHAKPAITLSYQELAIQ 68

Query: 56  ALRLVSALRALGA------DPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAGSET 109
                + L ALG       D   ++A  + N   W I D   +L    +      A    
Sbjct: 69  IQAFAAGLLALGVPTSTADDFPPRLAQFADNSPRWLIADQGTLLAGAANAVRGAQAEVSE 128

Query: 110 IDYCLEHSESKILIVGKLDDNKATAHVLAERPNLISISLPYPSAAKCQY-EFQTL----- 163
           + Y LE S S  LIV      +  A +   +P L S+SL +      +  E  +L     
Sbjct: 129 LLYVLEDSGSIGLIV------EDAALLKKLQPGLASLSLQFVIVLSDEVVEIDSLRVVGF 182

Query: 164 -----IKQHQPSEERPTHFDEKLMSIVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIE 218
                + +  P+ E     D +L +++YTSGT+G PKG ML++G        L   +  +
Sbjct: 183 SDVLEMGRSLPAPEPILQLD-RLATLIYTSGTTGPPKGVMLSHGNLLHQVTTLGVVVQPQ 241

Query: 219 ENDRLFSYLPLAHITERVYIFGSSIIGGVLTAFPESLDTFIEDVKMHRPTLFISVPRLWT 278
             D + S LP  H  ER   +   ++    T    +L    +D++ +RP   +SV RLW 
Sbjct: 242 PGDTVLSILPTWHSYERACEY--FLLSQGCTQVYTTLRNVKQDIRQYRPQFMVSVLRLWE 299

Query: 279 LFQQRIQDKL---PQKKLNIL-------------------LKIPFVNSLIKRKLADG--- 313
              + +Q +    P KK  ++                   L +  +N    ++LA+G   
Sbjct: 300 SIYEGVQKQFREQPAKKRRLIDTFFGLSQRYVLARRRWQGLDLLALNQSPAQRLAEGVRM 359

Query: 314 LGLDQARVLG--------------------CGSAPVSPALLEWYRSVGLNITEAWGMTES 353
           L L     LG                     G   ++  L  ++  VG+++   +G+TE+
Sbjct: 360 LALAPLHKLGDRLVYGKVREATGGRIRQVISGGGSLALHLDTFFEIVGVDLLVGYGLTET 419

Query: 354 FAYSTLNYPFRADKIGTVGNAGPGIELKIAEDEE-----------ILVRSKGLFAGYYKN 402
               T   P+   + G+ G   PG  ++I + E            +L +   +  GY+  
Sbjct: 420 SPVLTGRRPWHNLR-GSAGQPIPGTAIRIVDPETKENRPSGDRGLVLAKGPQIMQGYFNK 478

Query: 403 DTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKFVAPVPIEKKLFEYSR 462
             ATA++ + +GW  TGD+G +  EG L + GR KDT     G+ + P PIE      S 
Sbjct: 479 PEATAKAIDAEGWFDTGDLGYIVGEGNLVLTGRAKDTIVLTNGENIEPQPIEDACLRSSY 538

Query: 463 VEMMCLIGSGLPAPILLAVPH--------NFPHFDRARYERTTQKVI-ARINSELESH-- 511
           +  + L+G    +   L VP+        +     +   +   QK+I   +N E+     
Sbjct: 539 ISQIMLVGQDRKSLGALIVPNQEAIALWASEQGISQTDLQGVVQKLIREELNREVRDRPG 598

Query: 512 ----EQIKGVLMIKDPWSIDNGILTPTLKIKRHVLEKKY 546
               ++I    +I++P+S++NG LT TLKI+R+V+ + Y
Sbjct: 599 YRIDDRIGPFRLIEEPFSMENGQLTQTLKIRRNVVAEHY 637