Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 515 a.a., long-chain fatty acid CoA ligase from Sinorhizobium meliloti 1021

 Score =  110 bits (276), Expect = 1e-28
 Identities = 118/455 (25%), Positives = 192/455 (42%), Gaps = 57/455 (12%)

Query: 49  YAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAGSE 108
           YAE+ D + RL +A    G    D+V +   NC E      A++       PI  +  ++
Sbjct: 29  YAELDDLSTRLAAAFAENGVKRNDRVLVFMDNCWEAAAAIFAILKAGATFSPINASTKAD 88

Query: 109 TIDYCLEHSESK-ILIVGKLDDNKATAHVLA--ERPNLISISLPYPSAAKCQYEFQTLIK 165
            + Y +   E+  IL   KL    A A  LA    P + S + P          F+  + 
Sbjct: 89  KLAYIVADCEAAAILTQAKLMPVVAEALALAPGHAPFVASTAAPGGRIPDGAASFEECLT 148

Query: 166 QHQPSEERPTHFDEKLMSIVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIEENDRLFS 225
              P+  R    D  L  ++YTSG++G+PKG M+T+     +++ +  ++    +D + +
Sbjct: 149 A-APAPVRHGGIDVDLGMLIYTSGSTGRPKGVMMTHRNIDAASESITTYLRNTPDDIILN 207

Query: 226 YLPLAHITERVYIFGSSIIGGVLT-----AFPESLDTFIEDVKMHRPTLFISVPRLWTLF 280
            LPLA       +  +  +G  L      AFP+++    + ++  R T F  VP +  + 
Sbjct: 208 VLPLAFDYGLYQLLMAIRLGATLVLEKSFAFPQAI---FDRIRTERVTGFPLVPTMAAMI 264

Query: 281 QQRIQDKLPQKKLNILLKIPFVNSLIKRKLADGLGLDQARVLGCGSAPVSPALLEWYRSV 340
            Q                         R L  G  L   R L   +A + PA +   R +
Sbjct: 265 LQ------------------------MRDLEPGF-LPSLRYLSNTAAALPPAHIARLREL 299

Query: 341 --GLNITEAWGMTESFAYSTLNYPFRADKIGTVGNAGPGIELKIAEDE----------EI 388
             G  +   +G+TE    + L       + G+VG A P  E  + +DE          E+
Sbjct: 300 FPGARLYSMYGLTECKRCTYLPPEELDRRPGSVGIAIPNTEAFVVDDEGNRVPPGVPGEL 359

Query: 389 LVRSKGLFAGYYKNDTATAESF--NDDGW---LHTGDIGSLDSEGYLTIQGRKKDTFKTA 443
           ++R   +  GY++ND AT        + W   LHTGD+   D EG+L   GRK D  KT 
Sbjct: 360 VIRGPHVMQGYWRNDAATERMLRPGPNPWEKVLHTGDLFRTDEEGFLYFVGRKDDIIKT- 418

Query: 444 KGKFVAPVPIEKKLFEYSRVEMMCLIGSGLPAPIL 478
           +G+ VAP  +E  L  +  +    +I  G+P P+L
Sbjct: 419 RGEKVAPKEVETVLHAHPGIAEAVVI--GVPDPVL 451