Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 655 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  138 bits (347), Expect = 8e-37
 Identities = 150/585 (25%), Positives = 233/585 (39%), Gaps = 77/585 (13%)

Query: 27  AKERPNEVYLKQIINRQFVEFTYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFI 86
           AK  P ++ L++     + E T+AE           L+ LG + G  +AL+  N  EW  
Sbjct: 29  AKRFPQDIALREKDLGIWKEVTWAEYGLMVRLYALGLKDLGVERGQVIALLGANRPEWLW 88

Query: 87  CDLAMMLGDYISVPIFPTAGSETIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLISI 146
            ++A       S+ I+     +  DY L HS +  +I    +       + A  P+L  I
Sbjct: 89  GEIAAHALGCASLGIYKDVLDDEADYLLAHSGAVAVIAEDEEQVDKLLTLAARVPSLRHI 148

Query: 147 SLPYPSAAKCQYEFQTLIKQHQ----------------PSEERPTHFDEKLMSIVYTSGT 190
               P   + +Y    LI Q                    E    H D+  + +  TSGT
Sbjct: 149 VYCDPRGLR-KYSDPRLISQDDLKARGRALDARDPGLYEREVAAGHGDDVAV-LCTTSGT 206

Query: 191 SGQPKGAMLTYGAFTWSAQQLINHIGIEENDRLFSYLPLAHITERVYIFGSSIIGGVLTA 250
           + +PK AML  GAF       +        D   S LPL  I E+VY  G ++I   +  
Sbjct: 207 TARPKLAMLQAGAFLRHCLDYLEADPRHPGDDYVSVLPLPWIMEQVYAVGQALIARGIVN 266

Query: 251 FPESLDTFIEDVKMHRPTLFISVPRLWTLF----QQRIQDKLPQKKLNILLKIPF----- 301
           F E   T + D++   P   +  PR+W       + R+ D  P K+    + +       
Sbjct: 267 FVEEEATTMADLREIGPRFVLLAPRVWEGIAADVRARMMDASPFKRAMFEIGMGLGKRAL 326

Query: 302 --------VNSLIKRKLADGLGLDQARVLGCGSAPVSPALLEWYRSVGLNITEAWGMTE- 352
                     +L+ R L D LG         G A + P    ++ ++G+ + + +G TE 
Sbjct: 327 ARNRRSWLAEALLFRALRDRLGFSFLTSAATGGAAMGPETFSFFHAMGVPLKQLYGQTEL 386

Query: 353 SFAY----------STLNYPFRADKIGTVGNAGPGIELKIAEDEEILVRSKGLFAGYYKN 402
           + AY           T+  PF    +        G+        EIL R +GLFAGY+  
Sbjct: 387 AGAYVIHRAGDIDPETVGLPFAKSAVRIDNPDAEGVG-------EILGRDQGLFAGYFGA 439

Query: 403 DTATAESFNDDGWLHTGDIGSLDSE-GYLTIQGRKKDTFKTAKGKFVAPVPIEKKL-FEY 460
             ATA     DGWLHTGD G L  E G+L +  R KD    + G   +P  IE KL F  
Sbjct: 440 GDATAIDDLRDGWLHTGDAGFLKKENGHLVVIDRVKDLAVMSNGVRFSPQFIENKLKFSA 499

Query: 461 SRVEMMCLIGSGLPAPILLAV---------------PHNFPHFD----RARYERTTQKVI 501
              E + L   G   P L A+                 +F  +     R       +  +
Sbjct: 500 FIAEAVIL---GRDRPYLAAIICIRWSILAKWAEQRAISFTGYSSLAARPEVYALLRAEV 556

Query: 502 ARINSELESHEQIKGVLMIKDPWSIDNGILTPTLKIKRHVLEKKY 546
            R+N+ L + ++++  L++      D+G LT T K++R V+ +KY
Sbjct: 557 ERVNASLPAAQRVRKFLLLYKELDPDDGELTRTRKVRRGVVAEKY 601