Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  108 bits (270), Expect = 6e-28
 Identities = 117/469 (24%), Positives = 190/469 (40%), Gaps = 75/469 (15%)

Query: 46  EFTYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTA 105
           ++TY E+ ++  R  +  ++LG +PG +V L   N   + IC   ++    I V   P  
Sbjct: 48  KWTYRELGEQIDRACAGFQSLGVEPGTRVGLCLPNTPYYIICYYGVLKAGGIVVNFNPLY 107

Query: 106 GSETIDYCLEHSESKILIVGKLDDNKATAHVLA-------ERPNLISISLPYPSAAKCQY 158
               +   +E S + +++   LD  +    V A       ER  + S+S   PS     +
Sbjct: 108 VERELRELVEDSGTTLMVT--LDLRQIYPKVAALLGDTALERIVVCSMSAILPSVKSLLF 165

Query: 159 E------------------FQTLIKQHQPSEERPTHFDEKLMSIV--YTSGTSGQPKGAM 198
                              F  LI    P   RP   D      V  YT GT+G PKGAM
Sbjct: 166 SVLKRSELADVPTDRRHIGFAKLIATKTP--PRPVAIDPATAVAVLQYTGGTTGLPKGAM 223

Query: 199 LTYGAFTWSAQQLINHIGIEE--NDRLFSYLPLAHITERVYIFGSSI-IGGVLTAFPE-S 254
           LT+   T +  Q++          +++ + LP  H+         ++ +G  L   P   
Sbjct: 224 LTHANVTGNLTQILGWFPEARWGEEKMLAVLPFFHVFAMTVAMNVALALGAELILLPRFD 283

Query: 255 LDTFIEDVKMHRPTLFISVPRLWTLFQQRIQDKLPQKKLNILLKIPFVNSLIKRKLADGL 314
           L+T ++ +   +PTLF  VP +++              +  + K P+             
Sbjct: 284 LETVLKTIARKKPTLFPGVPTIYSAI------------IGAVAKTPY------------- 318

Query: 315 GLDQARVLGCGSAPVSPALLEWYRSV-GLNITEAWGMTESFAYSTLNYPFRADKIGTVGN 373
            L   R    G AP+   +   +  + G  + E +G++E+      N    A K G++G 
Sbjct: 319 DLSSLRFCLSGGAPLPIEVKTRFEELTGCTLIEGYGLSEASPVVCCNPLDGAIKPGSIGQ 378

Query: 374 AGPGIELKI------------AEDEEILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDI 421
             PG  ++I             E  EI VR   + AGY++    T ++F  DG L TGDI
Sbjct: 379 PLPGTTVEIRSVLDPALIVPRGERGEICVRGPQVMAGYWRRPQDTEDTF-IDGALRTGDI 437

Query: 422 GSLDSEGYLTIQGRKKDTFKTAKGKFVAPVPIEKKLFEYSRVEMMCLIG 470
           G +D EGY+ +  R KD      G  V P  IE+ L+++  V    +IG
Sbjct: 438 GYIDDEGYVFLVDRIKDVI-LCGGYNVYPRIIEEALYQHEAVAEAVVIG 485