Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., putative crotonobetaine/carnitine-CoA ligase from Phaeobacter inhibens DSM 17395

 Score =  115 bits (288), Expect = 4e-30
 Identities = 111/441 (25%), Positives = 184/441 (41%), Gaps = 58/441 (13%)

Query: 47  FTYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAG 106
           +TY ++A     L++ L  LG  PGD+V L+ +NC        A      ++VP+     
Sbjct: 29  WTYGDLARACNALMTHLADLGVGPGDRVMLLCENCCAAVAALFATSQLGAVAVPVNARMR 88

Query: 107 SETIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLISISLPYPSAAKCQYEFQTL-IK 165
           +  +D  L H++   +++       A AH  A R            A + + +F  L + 
Sbjct: 89  APEVDRILAHAQPAAVLLTAAASPDAAAH--ASRLG----------AQRVEGDFGCLHVV 136

Query: 166 QHQPSEERPTHFDEKLMSIVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIEENDRLFS 225
                 +      E L  ++YT+GT+G PKG ML++    +          +   D ++ 
Sbjct: 137 SQDAGGKSCAQIPEGLAVLLYTTGTTGAPKGVMLSHDNLKFGGGASARLRDMASEDVVYG 196

Query: 226 YLPLAHITERVYIFGSSIIGGVLTAFPESLDTFIEDVKMHRPTLFISVPRLWTLFQQRIQ 285
            LPL+H+      FG   +  VLTA                  +  +  RL T F     
Sbjct: 197 VLPLSHV------FG---LASVLTA----------------SVMIGAEVRLETRFTAERF 231

Query: 286 DKLPQKKLNILLKIPFVNSLI----KRKLADGLGLDQARVLGCGSAPVSPALLEWYRSV- 340
            +  +  + ++  +P +++L+    K +  D LG    R +  G+AP+ P   +W R   
Sbjct: 232 YQALRSGVTLVSGVPQMHALVMQYAKEQGLDHLGSPDLRYVSSGAAPLDP---DWKRRAE 288

Query: 341 ---GLNITEAWGMTESFAYSTLNYPFRADKIGTVGNAGPGIELKIAEDE--------EIL 389
              G+ +   +GMTE+ A          D   +VG   PG+EL++ +          EI 
Sbjct: 289 AFYGVALQNGYGMTEATAGICATRNGLGDPDTSVGPPLPGVELRLDQSVPGGGDGLGEIC 348

Query: 390 VRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKFVA 449
           +R   +  GY+ N  AT    +  GWL +GDIG LD  G L I GR K+      G  V 
Sbjct: 349 LRGGNVMLGYFANQEATQTVLDPAGWLRSGDIGRLDESGNLHIDGRAKELI-IHGGFNVF 407

Query: 450 PVPIEKKLFEYSRVEMMCLIG 470
           P  +E  L  + +V    ++G
Sbjct: 408 PPEVEAALNAHPQVVQSAVVG 428