Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., long-chain-fatty-acid- CoA ligase IcfB from Phaeobacter inhibens DSM 17395

 Score =  109 bits (272), Expect = 3e-28
 Identities = 115/452 (25%), Positives = 184/452 (40%), Gaps = 58/452 (12%)

Query: 49  YAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAGSE 108
           Y E+   A R+ +AL + G  PGD+VA             L  ++   I +P+ P     
Sbjct: 34  YGELFAGAERMAAALVSRGVAPGDRVAAQVDKSLAAIQLYLGTVMAGAIFLPLNPAYTEA 93

Query: 109 TIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLISISLPYPSAAKCQYEFQTLIKQH- 167
            + Y +  +  ++ +   +      A  +A    ++++        + Q     L   H 
Sbjct: 94  EVAYFIGDATPRVFVCNPVRHESLRA--VAGEATVLTLD------GEGQGSLADLAAGHA 145

Query: 168 --QPSEERPTHFDEKLMSIVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGIEENDRLFS 225
             +P E +P+     L +I+YTSGT+G+ KGAML++     ++  L ++      D L  
Sbjct: 146 GFEPIERKPSD----LAAILYTSGTTGRSKGAMLSHENLYSNSLTLRDYWQFTAEDVLIH 201

Query: 226 YLPLAHITERVYIFGSSIIGGVLTAFPESLDTFIEDVKMHRPTLFISVPRLWTLFQQRIQ 285
            LP+ H          +++ G         D       M   T  + VP  +T       
Sbjct: 202 ALPIFHTHGLFVATNVALLAGAQVVLLPGFDAEAILAAMPNATALMGVPTFYTRL----- 256

Query: 286 DKLPQKKLNILLKIPFVNSLIKRKLADGLGLDQARVLGCGSAPVSPALLE-WYRSVGLNI 344
                              L+  +L   L  +  R+   GSAP+     E W    G  I
Sbjct: 257 -------------------LVDARLTPDLAANM-RLFISGSAPLLVETHEQWEARTGHRI 296

Query: 345 TEAWGMTESFAYSTLNYPFRADKI-GTVGNAGPGIELKIAEDEEIL---------VRSKG 394
            E +GMTE+   ST N P+   ++ GTVG   PG+E ++  D   +         VR   
Sbjct: 297 LERYGMTET-NMSTSN-PYDGVRVAGTVGPPLPGVEARVTLDNAEIPLGEIGVLEVRGPN 354

Query: 395 LFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLTIQGRKKDTFKTAKGKFVAPVPIE 454
           +F GY++    TAE    DGW  TGD+  +DS GY+TI GR+KD    + G  V P  +E
Sbjct: 355 VFQGYWQMPEKTAEELRPDGWFITGDLAKIDSNGYVTIVGREKD-LVISGGFNVYPKEVE 413

Query: 455 KKLFEYSRVEMMCLIGSGLP----APILLAVP 482
             + +   V    +IG   P    A + + VP
Sbjct: 414 TLIDDLPGVLESAVIGVPHPDFGEAVVAVVVP 445