Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., putative long-chain-fatty-acid-CoA ligase from Phaeobacter inhibens DSM 17395

 Score =  215 bits (548), Expect = 4e-60
 Identities = 163/562 (29%), Positives = 257/562 (45%), Gaps = 60/562 (10%)

Query: 47  FTYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAG 106
           +++ +  D A ++   L ALG + G+ V+++S++  EW   D+ +     I+  ++ T  
Sbjct: 80  YSWQDYWDHAEKIGLGLMALGLERGEVVSILSEDRKEWLYLDMGIQGAGAIASGVYTTDS 139

Query: 107 SETIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLISI------SLPYPSAAKCQYEF 160
           ++ + Y +  S S+ L+V   +       + AE P+L  +       L      KC +  
Sbjct: 140 AQQLAYLVNDSGSRFLVVENDEQLDKFLEIEAEVPHLRWVIILDRDGLHDLRHEKCLFLD 199

Query: 161 QTLIKQHQPSEERPTHFDEKL--------MSIVYTSGTSGQPKGAMLTYGAFTWSAQQLI 212
           Q   +        PT F++ +          ++YTSGT+G PKGAML++     + +   
Sbjct: 200 QLYDQGAAYKIANPTAFEDAVGRSRPDDTALLIYTSGTTGLPKGAMLSHENILATMESGA 259

Query: 213 NHIGIEENDRLFSYLPLAHITERVYIFGSSIIGGVLTAFPESLDTFIEDVKMHRPTLFIS 272
             +     D    +LPL HI ER       +  G    F ES +T  ++++   P  F +
Sbjct: 260 RSLECYATDEQLCFLPLCHILERNVSVYLPMAAGSTVNFAESPETVFDNIQEVSPATFFA 319

Query: 273 VPRLWTLFQQRI--------------------------QDKLPQKKL--NILLKIPFVNS 304
           VPR+W     R+                             L  K +   I L+    + 
Sbjct: 320 VPRVWEKVYSRVLVLAQEATWLGRWAFNRAVAAGAARANYVLAAKPVPSGIALRYRIWDL 379

Query: 305 LIKRKLADGLGLDQARVLGCGSAPVSPALLEWYRSVGLNITEAWGMTESFAYSTLNYPFR 364
           L+ R L   LGLD+ R  G G+AP+SP LL WY S+G+ + E +GMTE+   +  N    
Sbjct: 380 LVLRNLRRMLGLDRLRRGGTGAAPISPELLRWYWSIGVPLIEGYGMTENAGLTAANRVL- 438

Query: 365 ADKIGTVGNAGPGIELKIAEDEEILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSL 424
           + + GTVG A PG+E++IA D EI +     F GY+     TAE++ +DGWL TGD+G L
Sbjct: 439 SHRPGTVGQAVPGVEIRIAPDGEIQLWGLNNFQGYWNKPEKTAETYTEDGWLRTGDVGQL 498

Query: 425 DSEGYLTIQGRKKDTFKTAKGKFVAPVPIEKKL-FEY----------SRVEMMCLIGSGL 473
           D  G+LTI GR KD   TA GK + P  IE +L F +           R  + CLI    
Sbjct: 499 DDAGFLTITGRIKDIIITAGGKNITPAEIESRLKFSHYISDAVVIGDRRKFLTCLIMIDQ 558

Query: 474 PAPILLAVPHNFPHFDRARYERTTQKV------IARINSELESHEQIKGVLMIKDPWSID 527
                 A     P  D A      Q V      +  +N +    EQIK   +I    + +
Sbjct: 559 ENVEKFAQDRKIPFSDFASLCAAEQVVDLIRGEVDAVNRDFARVEQIKDFRLINVLLTAE 618

Query: 528 NGILTPTLKIKRHVLEKKYHDV 549
           +  LT T+K+KR ++EKK+ ++
Sbjct: 619 DDELTATMKLKRGLVEKKHKNL 640