Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 598 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella loihica PV-4

 Score =  198 bits (504), Expect = 4e-55
 Identities = 154/556 (27%), Positives = 259/556 (46%), Gaps = 67/556 (12%)

Query: 49  YAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPTAGSE 108
           + E+ D+   +  AL A G    DKVA++S+NC +W   D+ ++    + VPI+PT+  E
Sbjct: 42  FDEIGDQ---IAKALIASGFAAQDKVAILSQNCPQWTCADVGVLKAKAVVVPIYPTSTLE 98

Query: 109 TIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLISISLPYPSAAKCQYE----FQTLI 164
              Y ++ +++K++ VG  +  +    +LA  P+L  I +     A  Q +    F +L+
Sbjct: 99  QARYIIDDAQAKLIFVGDAEQYRMARELLAICPSLTQIVVFDAEVALKQEDTAVHFDSLL 158

Query: 165 KQ-HQPSEERPTHFD------EKLMSIVYTSGTSGQPKGAMLTYGAFTWSAQQLINHIGI 217
            Q H P  +            + L++++YTSGT+G PKG ML Y       +Q    +  
Sbjct: 159 TQTHSPEVDAELAHRLANLALDDLLTLIYTSGTTGDPKGVMLDYRNIASVIRQHDTILPF 218

Query: 218 EENDRLFSYLPLAHITERVYIFGSSIIGG--VLTAFPESLDTFIEDVKMHRPTLFISVPR 275
              D   ++LPL+H+ ER + F     GG  V    P ++   I D++ H  TL + VPR
Sbjct: 219 TPGDVSLAFLPLSHVFERGWSFYVLCRGGHNVYLKDPMTVKEAIVDIRPH--TLCV-VPR 275

Query: 276 LWTLFQQRIQDKL-----PQKKLN-----------------------ILLKIPFVNSLIK 307
                   +QDK+      +KKL                        +  +    + L+ 
Sbjct: 276 FLEKVYSAVQDKVNKAPDTRKKLFAWAMSVGERQFEVSQGRAKASWWLKTQWKLAHKLVY 335

Query: 308 RKLADGLGLDQARVLGCGSAPVSPALLEWYRSVGLNITEAWGMTESFAYSTLNYPFRADK 367
            KL   LG  + + + CG A +   +  ++  + + +   +GMTE+ A  T N       
Sbjct: 336 SKLQQVLG-GRLKFMPCGGAALDQNVASFFHGIDIPVLCGYGMTETTATVTCN-TLDNRV 393

Query: 368 IGTVGNAGPGIELKIAEDEEILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSE 427
            G+ G   P +E+K+ +D EILVR   +  GYY     TA+SF +DGWL TGD G +D +
Sbjct: 394 AGSNGKTLPEVEIKLGKDNEILVRGDTVMRGYYNRPQETADSF-EDGWLKTGDAGQIDEQ 452

Query: 428 GYLTIQGRKKDTFKTAKGKFVAPVPIEKKLFEYSRVEMMCLIGSGLPAPILLAVP----- 482
           G L I  R K+  KT+ GK++AP  +E K+     +E + +I         L VP     
Sbjct: 453 GNLFITDRIKELMKTSNGKYIAPQRVEGKVGCCPFIEQVAVIADAKNYVTALIVPAFESL 512

Query: 483 ---------HNFPHFDRARYERTT---QKVIARINSELESHEQIKGVLMIKDPWSIDNGI 530
                    H     +  R+       ++ +  +  EL   E+IK   ++ + +S++ G+
Sbjct: 513 EAWAEEKGLHYESPMELLRHSHVIEHFEQRLKHLQQELAGFEKIKKFTLLPEAFSMEAGL 572

Query: 531 LTPTLKIKRHVLEKKY 546
           LTPT+K++R ++  KY
Sbjct: 573 LTPTMKLRRKMIYHKY 588