Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 655 a.a., AMP-dependent synthetase and ligase (RefSeq) from Shewanella loihica PV-4

 Score =  144 bits (362), Expect = 1e-38
 Identities = 133/560 (23%), Positives = 234/560 (41%), Gaps = 57/560 (10%)

Query: 44  FVEFTYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFP 103
           + EF++ +  ++   +  A   LG      +AL+ +N  EW   ++A       S+ I+ 
Sbjct: 46  WTEFSWQDYHNRVKWMALAFDHLGIKSHSTIALLGENRPEWVWGEVAAHALACFSLGIYQ 105

Query: 104 TAGSETIDYCLEHSESKILIVGKLDDNKATAHVLAERPNLISISLPYPSAAKCQYEFQTL 163
            +  E + Y L  SE+++++    +       +    P++  I    P   + +Y+   L
Sbjct: 106 DSLHEEVAYLLNRSEAQVIVAEDEEQCDKLLELGDSIPSVKYIVYCDPRGMR-KYDDPRL 164

Query: 164 IKQHQ-------PSEERPTHFD--------EKLMSIVYTSGTSGQPKGAMLTYGAFTWSA 208
           I   +           +P H+D        E +     TSGT+ +PK  +L    F    
Sbjct: 165 ISVEEIYRLGQEVDNTQPRHYDNLVDAGKAENIAIYCTTSGTTSKPKIVLLQGSKFIDHC 224

Query: 209 QQLINHIGIEENDRLFSYLPLAHITERVYIFGSSIIGGVLTAFPESLDTFIEDVKMHRPT 268
              +        D   S LPL  I E+VY  G ++I   +  F E  +T + D++   P+
Sbjct: 225 CSYLRADPRAPGDNYVSVLPLPWIMEQVYAVGQALIARQIVNFVEEQETMMADLREIGPS 284

Query: 269 LFISVPRLWTLF----QQRIQDKLP--QKKLNILLK-----------IPFVNSLIKRKLA 311
             +  PR+W       + R+ D  P  QK  +  +K               + ++ + L 
Sbjct: 285 FVLLAPRVWEGILADVKARMMDSTPLKQKLFDFAMKRAEQRLAEGRRSKLADIILMKALR 344

Query: 312 DGLGLDQARVLGCGSAPVSPALLEWYRSVGLNITEAWGMTESFAYSTLNYPFRADKIGTV 371
           D LG    +    G A + P   ++++++G+ + + +G TE     T++     D   TV
Sbjct: 345 DRLGFSFLKSAATGGAAMGPDTFKFFQAIGVPLRQLYGQTEMCGAYTIHDEHDVD-YDTV 403

Query: 372 GNAGPGIELKIAEDE-----EILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDS 426
           G A    ELK+   +     E++ R+ G+F GY  + TA  E   D GW+HTGD G    
Sbjct: 404 GVAFDTAELKVINTDSEGVGEVIARTVGMFNGYLGDQTAYDEDVKD-GWMHTGDAGYFKP 462

Query: 427 EGYLTIQGRKKDTFKTAKGKFVAPVPIEKKLFEYSRVEMMCLIGSGLP--APIL------ 478
            G+L +  R KD  KT++G   +P  IE KL   S +    ++G   P  + IL      
Sbjct: 463 SGHLVVIDRIKDLAKTSQGIQYSPQYIENKLKFSSFIGEAVILGKDKPYLSAILCIRFSI 522

Query: 479 ---------LAVPHNFPHFDRARYERTTQKVIARINSELESHEQIKGVLMIKDPWSIDNG 529
                    LA  +           +  Q  + R+N  L   ++I   +++      D+G
Sbjct: 523 VSKWAEQQGLAFTNYTNLSSLPEVYQQLQAEVERVNETLPDAQKINKFILLYKELDADDG 582

Query: 530 ILTPTLKIKRHVLEKKYHDV 549
            LT T K++R V+  KY ++
Sbjct: 583 ELTRTRKVRRGVIADKYGEI 602