Pairwise Alignments

Query, 563 a.a., AMP-dependent synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 557 a.a., putative long-chain-fatty-acid--CoA ligase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  150 bits (380), Expect = 1e-40
 Identities = 127/446 (28%), Positives = 209/446 (46%), Gaps = 41/446 (9%)

Query: 45  VEFTYAEVADKALRLVSALRALGADPGDKVALISKNCAEWFICDLAMMLGDYISVPIFPT 104
           V +TY +VA +  R+    +      GDK+A+I KN A W I  +A +    I VPI   
Sbjct: 30  VHYTYGQVAGEIARMHLLFKHCSLRRGDKIAVIGKNNAHWCIAYMATITYGAIIVPILQD 89

Query: 105 AGSETIDYCLEHSESKILIVG-----KLDDNKATAHVLAERPNLISISLPYPSAAKCQYE 159
                + + + HSES  L         L++ K T   L    +L      Y    +   +
Sbjct: 90  FTPNDVHHIVNHSESVFLFTSDSIWESLEEEKLTG--LRGVFSLTDFRCLYQRDGETIQK 147

Query: 160 FQTLIKQHQPSE----------ERPTHFDEKLMSIVYTSGTSGQPKGAMLTYGAFTWSAQ 209
           F   +     +           +  T  ++K+M + YTSGT+G  KG MLT      +  
Sbjct: 148 FLVHLNDEMYAAYPKGFTREDIQYTTLSNDKVMLLNYTSGTTGFSKGVMLTGNNLAGNVT 207

Query: 210 QLINHIGIEENDRLFSYLPLAHITERVYIFGSSIIGGV------LTAFPESLDTFIEDVK 263
             I    +++ D++ S+LPLAH     + F ++   G        T  P+ +    E+VK
Sbjct: 208 FGIRTELLKKGDKVLSFLPLAHAYGCAFDFLTATAVGTHVTLLGKTPSPKIIMKAFEEVK 267

Query: 264 MHRPTLFISVPR-LWTLFQQRIQDKLPQKKLNILLKIPFVNSLI----KRKLADGLGLDQ 318
              P L I+VP  +  +++  IQ  + +K +   L IP +++ I    ++KL D LG  +
Sbjct: 268 ---PNLIITVPLVIEKIYKNVIQPLINKKGMKWALNIPLLDTQIYNQIRKKLIDALG-GR 323

Query: 319 ARVLGCGSAPVSPALLEWYRSVGLNITEAWGMTESFAYSTLNY-PFRADKIGTVGNAGPG 377
            + +  G A ++  + E++  +    T  +GMTE      ++Y P+    +G+ G     
Sbjct: 324 FKEIIIGGAAMNQEVEEFFYKIKFPFTIGYGMTE--CGPLISYAPWNEFILGSSGKVLDI 381

Query: 378 IELKI------AEDEEILVRSKGLFAGYYKNDTATAESFNDDGWLHTGDIGSLDSEGYLT 431
           +E +I      AE  EI VR + +  GYYKN  AT E F +DGWL TGD+G++D+ G + 
Sbjct: 382 MEARIYKENPEAETGEIQVRGENVMVGYYKNPEATQEVFTEDGWLRTGDLGTMDASGNIF 441

Query: 432 IQGRKKDTFKTAKGKFVAPVPIEKKL 457
           I+GR K    ++ G+ + P  +E KL
Sbjct: 442 IRGRLKSMILSSSGQNIFPEELEAKL 467