Pairwise Alignments

Query, 384 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., response regulator containing a CheY-like receiver domain and an HD-GYP domain from Dechlorosoma suillum PS

 Score =  196 bits (499), Expect = 7e-55
 Identities = 124/357 (34%), Positives = 180/357 (50%), Gaps = 2/357 (0%)

Query: 19  LNTYLTNMLEKIRVELPDIQRISFALYDEKKDSIKTCADSSPVSHDFVHYELPLANLPSL 78
           L   L  + + +R  LP I RI+ A Y+   D++KT   SS        YE  L+   SL
Sbjct: 41  LQEKLERIHDHLRQSLPFIDRIAVASYEPLTDNLKTFLHSSDGEAPLSFYESKLSASSSL 100

Query: 79  QQSKESGALRIIHDLANQAKSHT-PHNRWLLEQQYCSSLVKPVFDQHTFVGFLFFNASMS 137
            +   S   R+I+D+   ++     H+R +    Y +S   PV       GFLFFN+   
Sbjct: 101 TEIATSRRPRVINDMDVLSQDLVREHSRRVRSSGYGASYTMPVAHNGALYGFLFFNSRQK 160

Query: 138 HYFSASVVERLETYLSLIQQSICGEYALIHQLVDHVHQIETQSPEHWLHIKQHKERISRY 197
             F A  +  L      +   +  E A +  L+  V  +   +         H ER++ Y
Sbjct: 161 WVFDAQALHHLNMVGHQLSLVVVNELACLRTLMASVRTVTQIAQIRDFETGAHLERMAHY 220

Query: 198 ARIIALDVADQYALDDELIENISQFATCHDLGKLALPADLLQKRASLANHEKEQVHNHIE 257
           +RIIA +VA ++ LDD  +E +  FA  HD+GK+A+P  LL K   L   E  Q+  H  
Sbjct: 221 SRIIAQEVAPRFKLDDAFVEYLYLFAPLHDIGKVAVPDSLLLKPGRLEPEEFVQIQQHTV 280

Query: 258 YGIDLLNEVIAKLGTPHHPCLAVLREIMAYHHEFLDGSGYPFGLVSDQIPIPARIIAVAN 317
            G  +++ ++   G        +LR I+ +HHE LDGSGYP GL  D IP+ ARI+AVA+
Sbjct: 281 KGRQIVDSMLENFGIQGMQRSEMLRNIVLHHHESLDGSGYPHGLRGDDIPVEARIVAVAD 340

Query: 318 IFDALTAHRPYKQAQSIPHALLELEKMVSDGKLDRHCVNALRENQEELKEIVARFPE 374
           +FDALT+ RPYK+A S   A   L +M +  K D  CV+AL  N+ E+  I  RF E
Sbjct: 341 VFDALTSERPYKEAWSNDQAFSMLAEM-AGRKFDHDCVDALLRNRSEIDRIQGRFAE 396