Pairwise Alignments

Query, 384 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 723 a.a., putative PAS/PAC sensor protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 74.3 bits (181), Expect = 1e-17
 Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 11/166 (6%)

Query: 195 SRYARIIALDVADQYALDDELIENISQFATCHDLGKLALPADLLQKRASLANHEKEQVHN 254
           SR   I A   A    L +  +  +   A    +GK+ +P D+L K   L   EK+++  
Sbjct: 543 SRLMGIAASLTARAMGLGERDVATVEAAANLSQVGKMFVPRDILNKPGKLTAQEKQEMER 602

Query: 255 HIEYGIDLLNEVIAKLGTPHHPCLAVLREIMAYHHEFLDGSGYPFGLVSDQIPIPARIIA 314
           H+EY  D+L+ +   L     P L  + ++    +E  DG GYP GL  +QI   ARI+A
Sbjct: 603 HVEYARDVLSSIEFDL-----PVLPAIIQM----NERQDGKGYPEGLSGEQISAHARILA 653

Query: 315 VANIFDALTAHRPYKQAQSIPHALLELEKMVSDGKLDRHCVNALRE 360
           V N F A+   R Y+ A  +   L  LE        D   V+ALR+
Sbjct: 654 VTNAFCAMLRPRSYRPALPLEKVLDALESQTD--SYDVSVVHALRD 697