Pairwise Alignments

Query, 384 a.a., HD-GYP domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., HD domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 79.0 bits (193), Expect = 2e-19
 Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 9/145 (6%)

Query: 211 LDDELIENISQFATCHDLGKLALPADLLQKRASLANHEKEQVHNHIEYGIDLLNEVIAKL 270
           LD  ++  ++     HD+GK+ +   +L K   L   E E +  H  Y +++++E     
Sbjct: 177 LDRSMLREMAVGGILHDIGKIKVDNKVLHKPGKLTPEEFEHMKLHQVYALEIMSETKG-- 234

Query: 271 GTPHHPCLAVLREIMAYHHEFLDGSGYPFGLVSDQIPIPARIIAVANIFDALTAHRPYKQ 330
                    + +++   HHE LDG GYP GL  D+IP+  R+  + +IFDALTA R YK+
Sbjct: 235 ------LSQISKDVCLMHHEKLDGRGYPRGLKGDEIPLHGRMSCIVDIFDALTATRCYKE 288

Query: 331 AQSIPHALLELEKMVSDGKLDRHCV 355
           A S P A  ++   ++   LD+  V
Sbjct: 289 AMS-PAAAFKILLSLTPFHLDQQLV 312